RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA826497" and tax_kingdom = "Loebvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 2 ✖

bioproject 1

  • PRJNA826497 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11024394 11024394 PRJNA826497_S_NODE_6869_length_208_cov_9.788571_g6829_i0 PRJNA826497 6869 208 9.788571 20.36022768 Tubulavirales sp. 2833306 Viruses Viruses 316 5.849999999999998e-82   NTclustered gi|2906153236|gb|PQ646714.1| 2833306 g6829 i0 94.203 0.995192307692308 207 12 99 0 1 207 382 588 MAG: Tubulavirales sp. isolate k127_4197263 genomic sequence blastn 207 316 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales     Tubulavirales sp.
11024408 11024408 PRJNA826497_S_NODE_9869_length_188_cov_2.380645_g9829_i0 PRJNA826497 9869 188 2.380645 4.4756126 Tubulavirales sp. 2833306 Viruses Viruses 303 4.03e-78   NTclustered gi|2906153236|gb|PQ646714.1| 2833306 g9829 i0 95.745 1 188 8 100 0 1 188 856 669 MAG: Tubulavirales sp. isolate k127_4197263 genomic sequence blastn 188 303 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales     Tubulavirales sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;