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contig_metadata

101 rows where analysis = "blastn", bioproject = "PRJNA825466" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 101 ✖

bioproject 1

  • PRJNA825466 · 101 ✖

analysis 1

  • blastn · 101 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
820405 820405 PRJNA825466_P_NODE_14061_length_263_cov_2.010526_g13960_i0 PRJNA825466 14061 263 2.010526 5.28768338 Orthorubulavirus mammalis 3052558 Viruses Viruses 453 5.63e-123   NTclustered gi|1841764908|gb|MT124463.1| 2905673 g13960 i0 98.077 62.5893536121673 260 5 99 0 4 263 15246 14987 Parainfluenza virus 5 isolate China/HB01/2019, complete genome blastn 16461 453 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
820430 820430 PRJNA825466_P_NODE_2141_length_483_cov_1.790244_g2041_i0 PRJNA825466 2141 483 1.790244 8.64687852 Alphapapillomavirus 9 337041 Viruses Viruses 893 0   NTclustered gi|1227043593|dbj|LC270031.1| 10618 g2041 i0 100 100 483 0 100 0 1 483 2586 2104 Human papillomavirus type 52 DNA, complete genome, isolate: K1066 blastn 48300 893 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
820453 820453 PRJNA825466_P_NODE_29341_length_239_cov_3.861446_g29240_i0 PRJNA825466 29341 239 3.861446 9.22885594 Alphapapillomavirus 7 337042 Viruses Viruses 442 1.0899999999999994e-119   NTclustered gi|2733486694|gb|PP781984.1| 333761 g29240 i0 100 100 239 0 100 0 1 239 3939 4177 Human papillomavirus 18 isolate InDRE-121Mex/Mexico/2023, complete genome blastn 23900 442 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 7
820466 820466 PRJNA825466_P_NODE_4601_length_363_cov_1.400000_g4500_i0 PRJNA825466 4601 363 1.4 5.082 Alphapapillomavirus 9 337041 Viruses Viruses 665 0   NTclustered gi|217316703|gb|FJ407211.1| 10598 g4500 i0 99.725 100 363 1 100 0 1 363 3198 3560 Human papillomavirus type 58 isolate HPV58SC79 E6 protein and E7 protein genes, complete cds; E1 protein genes, partial cds; E2 protein, E4 protein, and E5 protein genes, complete cds; and L2 protein gene, partial cds blastn 36300 665 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
820479 820479 PRJNA825466_P_NODE_701_length_800_cov_3.532325_g619_i0 PRJNA825466 701 800 3.532325 28.2586 Alphapapillomavirus 9 337041 Viruses Viruses 1478 0   NTclustered gi|2065708512|gb|MZ374431.1| 10618 g619 i0 100 99.99875 800 0 100 0 1 800 2082 1283 Human papillomavirus 52 isolate PAP2912, complete genome blastn 79999 1478 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
2095925 2095925 PRJNA825466_P_NODE_12362_length_273_cov_1.245000_g12261_i0 PRJNA825466 12362 273 1.245 3.39885 Orbivirus magninsulae 3431249 Viruses Viruses 54.7 0.007   NTclustered gi|2672713167|gb|OR645559.1| 881914 g12261 i0 94.444 0.234432234432234 36 0 13 2 239 273 35 1 MAG: Tribec virus isolate Romania segment 7, complete sequence blastn 64 54.7 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Orbivirus Orbivirus magninsulae
2095958 2095958 PRJNA825466_P_NODE_2102_length_488_cov_0.809639_g2002_i0 PRJNA825466 2102 488 0.809639 3.95103832 Alphapapillomavirus 9 337041 Viruses Viruses 889 0   NTclustered gi|2513092531|gb|OP900893.1| 10586 g2002 i0 99.589 99.3627049180328 487 2 99 0 2 488 967 481 Human papillomavirus 33 isolate 33L2CHN297 late protein L2 (L2) gene, complete cds blastn 48489 889 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
2095961 2095961 PRJNA825466_P_NODE_2162_length_481_cov_2.647059_g2062_i0 PRJNA825466 2162 481 2.647059 12.73235379 Alphapapillomavirus 7 337042 Viruses Viruses 889 0   NTclustered gi|2733486694|gb|PP781984.1| 333761 g2062 i0 100 100 481 0 100 0 1 481 2253 2733 Human papillomavirus 18 isolate InDRE-121Mex/Mexico/2023, complete genome blastn 48100 889 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 7
2503673 2503673 PRJNA825466_P_NODE_642_length_836_cov_2.011796_g561_i0 PRJNA825466 642 836 2.011796 16.81861456 Paramyxoviridae 11158 Viruses Viruses 1511 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g561 i0 99.637 68.2571770334928 827 3 99 0 6 832 2872 2046 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 57063 1511 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
3371313 3371313 PRJNA825466_P_NODE_8143_length_306_cov_0.991416_g8042_i0 PRJNA825466 8143 306 0.991416 3.03373296 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 566 8.239999999999998e-157   NTclustered gi|1386447295|gb|MG298834.1| 10376 g8042 i0 100 100.356209150327 306 0 100 0 1 306 4780 5085 Human gammaherpesvirus 4 isolate GK_BL42, partial genome blastn 30709 566 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
3780074 3780074 PRJNA825466_P_NODE_24443_length_244_cov_2.239766_g24342_i0 PRJNA825466 24443 244 2.239766 5.46502904 Lymphocryptovirus 10375 Viruses Viruses 446 8.639999999999999e-121   NTclustered gi|1540305393|gb|MH590479.1| 10376 g24342 i0 99.59 100 244 1 100 0 1 244 49524 49767 Human gammaherpesvirus 4 isolate HKHD110, partial genome blastn 24400 446 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
4648792 4648792 PRJNA825466_P_NODE_1504_length_563_cov_2.744898_g1407_i0 PRJNA825466 1504 563 2.744898 15.45377574 Alphapapillomavirus 9 337041 Viruses Viruses 791 0   NTclustered gi|1227044160|dbj|LC270094.1| 10598 g1407 i0 92.74 97.7424511545293 551 34 98 2 1 551 5322 5866 Human papillomavirus type 58 DNA, complete genome, isolate: K1218 blastn 55029 791 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
4648804 4648804 PRJNA825466_P_NODE_1924_length_507_cov_2.218894_g1824_i0 PRJNA825466 1924 507 2.218894 11.24979258 Betacoronavirus pandemicum 3418604 Viruses Viruses 937 0   NTclustered gi|2438993056|gb|OQ369223.1| 2697049 g1824 i0 100 100 507 0 100 0 1 507 14172 13666 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/TX-CDC-QDX45690442/2023, complete genome blastn 50700 937 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
4648848 4648848 PRJNA825466_P_NODE_29864_length_217_cov_6.555556_g29763_i0 PRJNA825466 29864 217 6.555556 14.22555652 Betacoronavirus pandemicum 3418604 Viruses Viruses 401 1.6499999999999994e-107   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g29763 i0 100 100 217 0 100 0 1 217 21221 21005 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 21700 401 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
5056171 5056171 PRJNA825466_P_NODE_15684_length_254_cov_1.276243_g15583_i0 PRJNA825466 15684 254 1.276243 3.24165722 Lymphocryptovirus 10375 Viruses Viruses 464 2.4999999999999994e-126   NTclustered gi|1862857967|emb|LR812925.1| 10376 g15583 i0 99.606 100 254 1 100 0 1 254 28320 28067 Human gammaherpesvirus 4 isolate eBL_CL-01 genome assembly, chromosome: EBV blastn 25400 464 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
5056173 5056173 PRJNA825466_P_NODE_17304_length_250_cov_1.677966_g17203_i0 PRJNA825466 17304 250 1.677966 4.194915 root 1 Root_unresolved Root_unresolved 462 8.83e-126   NTclustered gi|2288721861|gb|OP218818.1| 10535 g17203 i0 100 100 250 0 100 0 1 250 1859 2108 Unidentified adenovirus strain CHOP Ad5 blastn 25000 462 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
5056210 5056210 PRJNA825466_P_NODE_764_length_763_cov_1.681159_g679_i0 PRJNA825466 764 763 1.681159 12.82724317 Orthorubulavirus 2560195 Viruses Viruses 1384 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g679 i0 99.604 82.0275229357798 758 3 99 0 6 763 31 788 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 62587 1384 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
5923631 5923631 PRJNA825466_P_NODE_11965_length_275_cov_1.470297_g11864_i0 PRJNA825466 11965 275 1.470297 4.04331675 Alphapapillomavirus 6 337050 Viruses Viruses 497 2.7e-136   NTclustered gi|1898671329|emb|LR862081.1| 37119 g11864 i0 99.273 79.6690909090909 275 2 100 0 1 275 7206 7480 Human papillomavirus type 66 isolate LNS9786324_HPV66, complete genome blastn 21909 497 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 6
5923635 5923635 PRJNA825466_P_NODE_12825_length_270_cov_1.954315_g12724_i0 PRJNA825466 12825 270 1.954315 5.2766505 Alphapapillomavirus 9 337041 Viruses Viruses 494 3.4199999999999996e-135   NTclustered gi|2065708512|gb|MZ374431.1| 10618 g12724 i0 100 98.8888888888889 267 0 99 0 4 270 2988 3254 Human papillomavirus 52 isolate PAP2912, complete genome blastn 26700 494 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
5923639 5923639 PRJNA825466_P_NODE_13685_length_265_cov_1.942708_g13584_i0 PRJNA825466 13685 265 1.942708 5.1481762 Betacoronavirus pandemicum 3418604 Viruses Viruses 490 4.3299999999999986e-134   NTclustered gi|1920148641|gb|MW184352.1| 2697049 g13584 i0 100 100 265 0 100 0 1 265 7350 7086 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/AUS/VIC15830/2020, complete genome blastn 26500 490 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
5923659 5923659 PRJNA825466_P_NODE_1965_length_502_cov_1.708625_g1865_i0 PRJNA825466 1965 502 1.708625 8.5772975 Betacoronavirus pandemicum 3418604 Viruses Viruses 922 0   NTclustered gi|2116533731|emb|OU829539.1| 2697049 g1865 i0 99.801 100 502 1 100 0 1 502 11133 10632 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 50200 922 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
5923687 5923687 PRJNA825466_P_NODE_28025_length_241_cov_4.208333_g27924_i0 PRJNA825466 28025 241 4.208333 10.14208253 Betacoronavirus pandemicum 3418604 Viruses Viruses 446 8.519999999999999e-121   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g27924 i0 100 100 241 0 100 0 1 241 24589 24829 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 24100 446 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
5923701 5923701 PRJNA825466_P_NODE_7345_length_314_cov_1.701245_g7244_i0 PRJNA825466 7345 314 1.701245 5.3419093 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 580 3.0299999999999992e-161   NTclustered gi|747017592|dbj|AB850660.1| 10376 g7244 i0 100 278.46178343949 314 0 100 0 1 314 169437 169124 Human herpesvirus 4 DNA, complete genome, strain: HN18 blastn 87437 580 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
7198608 7198608 PRJNA825466_P_NODE_406_length_1022_cov_2.084299_g335_i0 PRJNA825466 406 1022 2.084299 21.30153578 Betacoronavirus pandemicum 3418604 Viruses Viruses 1888 0   NTclustered gi|1854182511|gb|MT605815.1| 2697049 g335 i0 100 100 1022 0 100 0 1 1022 2286 3307 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-S112/2020, complete genome blastn 102200 1888 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
7198618 7198618 PRJNA825466_P_NODE_8846_length_298_cov_2.355556_g8745_i0 PRJNA825466 8846 298 2.355556 7.01955688 Alphapapillomavirus 9 337041 Viruses Viruses 470 6.449999999999999e-128   NTclustered gi|217316703|gb|FJ407211.1| 10598 g8745 i0 100 102.040268456376 254 0 100 0 1 254 4217 4470 Human papillomavirus type 58 isolate HPV58SC79 E6 protein and E7 protein genes, complete cds; E1 protein genes, partial cds; E2 protein, E4 protein, and E5 protein genes, complete cds; and L2 protein gene, partial cds blastn 30408 470 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
8473316 8473316 PRJNA825466_P_NODE_16407_length_251_cov_0.865169_g16306_i0 PRJNA825466 16407 251 0.865169 2.17157419 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 464 2.47e-126   NTclustered gi|747017440|dbj|AB850654.1| 10376 g16306 i0 100 100.517928286853 251 0 100 0 1 251 118549 118799 Human herpesvirus 4 DNA, complete genome, strain: HN15 blastn 25230 464 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
8473319 8473319 PRJNA825466_P_NODE_1707_length_534_cov_1.631236_g1608_i0 PRJNA825466 1707 534 1.631236 8.71080024 Alphapapillomavirus 9 337041 Viruses Viruses 976 0   NTclustered gi|1227044160|dbj|LC270094.1| 10598 g1608 i0 99.625 100 534 2 100 0 1 534 4694 5227 Human papillomavirus type 58 DNA, complete genome, isolate: K1218 blastn 53400 976 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
8473361 8473361 PRJNA825466_P_NODE_3367_length_406_cov_2.063063_g3266_i0 PRJNA825466 3367 406 2.063063 8.37603578 Betacoronavirus pandemicum 3418604 Viruses Viruses 750 0   NTclustered gi|2027824975|gb|MW967642.1| 2697049 g3266 i0 100 100 406 0 100 0 1 406 1297 1702 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/NJ-CDC-ASC210012274/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds blastn 40600 750 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
8473363 8473363 PRJNA825466_P_NODE_3587_length_396_cov_3.260062_g3486_i0 PRJNA825466 3587 396 3.260062 12.90984552 Betacoronavirus pandemicum 3418604 Viruses Viruses 732 0   NTclustered gi|2193475630|gb|OM664681.1| 2697049 g3486 i0 100 99.9949494949495 396 0 100 0 1 396 29841 29446 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/PA-CDC-STM-E5GUWP394/2022, complete genome blastn 39598 732 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
8473378 8473378 PRJNA825466_P_NODE_767_length_762_cov_2.728592_g682_i0 PRJNA825466 767 762 2.728592 20.79187104 Betacoronavirus pandemicum 3418604 Viruses Viruses 1391 0   NTclustered gi|2635535590|emb|OY977775.1| 2697049 g682 i0 99.607 100.517060367454 763 2 100 1 1 762 14348 15110 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 76594 1391 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
8881193 8881193 PRJNA825466_P_NODE_14667_length_260_cov_1.176471_g14566_i0 PRJNA825466 14667 260 1.176471 3.0588246 Lymphocryptovirus 10375 Viruses Viruses 481 2.55e-131   NTclustered gi|1862917033|emb|LR812981.1| 10376 g14566 i0 100 100.992307692308 260 0 100 0 1 260 113682 113941 Human gammaherpesvirus 4 isolate HC-0002 genome assembly, chromosome: EBV blastn 26258 481 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
8881219 8881219 PRJNA825466_P_NODE_4807_length_358_cov_1.010526_g4706_i0 PRJNA825466 4807 358 1.010526 3.61768308 Lymphocryptovirus 10375 Viruses Viruses 662 0   NTclustered gi|1519305892|dbj|AP019128.1| 10376 g4706 i0 100 100 358 0 100 0 1 358 54227 54584 Human gammaherpesvirus 4 UPN326_PBMC DNA, nearly complete genome blastn 35800 662 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
9748428 9748428 PRJNA825466_P_NODE_1588_length_550_cov_1.922432_g1490_i0 PRJNA825466 1588 550 1.922432 10.573376 Alphapapillomavirus 9 337041 Viruses Viruses 994 0   NTclustered gi|1227043593|dbj|LC270031.1| 10618 g1490 i0 99.815 98.3636363636364 541 1 98 0 1 541 541 1 Human papillomavirus type 52 DNA, complete genome, isolate: K1066 blastn 54100 994 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
9748434 9748434 PRJNA825466_P_NODE_1848_length_515_cov_2.199095_g1748_i0 PRJNA825466 1848 515 2.199095 11.32533925 Betacoronavirus pandemicum 3418604 Viruses Viruses 948 0   NTclustered gi|1934877293|gb|MW276335.1| 2697049 g1748 i0 99.806 100 515 1 100 0 1 515 11191 11705 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-CZB-10798/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds blastn 51500 948 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
9748443 9748443 PRJNA825466_P_NODE_21368_length_247_cov_0.885057_g21267_i0 PRJNA825466 21368 247 0.885057 2.18609079 Betacoronavirus pandemicum 3418604 Viruses Viruses 457 4.05e-124   NTclustered gi|2182078985|gb|OM344698.1| 2697049 g21267 i0 100 100 247 0 100 0 1 247 27024 26778 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/TX-CDC-LC0474858/2022, complete genome blastn 24700 457 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
9748493 9748493 PRJNA825466_P_NODE_5368_length_345_cov_2.915441_g5267_i0 PRJNA825466 5368 345 2.915441 10.05827145 Betacoronavirus pandemicum 3418604 Viruses Viruses 638 1.97e-178   NTclustered gi|2028980905|gb|MZ002360.1| 2697049 g5267 i0 100 100 345 0 100 0 1 345 9780 10124 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-LC0038184/2021, complete genome blastn 34500 638 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
11024140 11024140 PRJNA825466_P_NODE_2149_length_482_cov_2.567237_g2049_i0 PRJNA825466 2149 482 2.567237 12.37408234 Betacoronavirus pandemicum 3418604 Viruses Viruses 891 0   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g2049 i0 100 100 482 0 100 0 1 482 25588 26069 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 48200 891 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
11024166 11024166 PRJNA825466_P_NODE_29209_length_241_cov_0.904762_g29108_i0 PRJNA825466 29209 241 0.904762 2.18047642 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 446 8.519999999999999e-121   NTclustered gi|747017592|dbj|AB850660.1| 10376 g29108 i0 100 101.701244813278 241 0 100 0 1 241 36234 36474 Human herpesvirus 4 DNA, complete genome, strain: HN18 blastn 24510 446 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
11024174 11024174 PRJNA825466_P_NODE_4169_length_375_cov_2.612583_g4068_i0 PRJNA825466 4169 375 2.612583 9.79718625 Alphapapillomavirus 9 337041 Viruses Viruses 693 0   NTclustered gi|2318781025|gb|ON381707.1| 10618 g4068 i0 100 100 375 0 100 0 1 375 986 612 Human papillomavirus 52 isolate HPV52-L1-LYY-SH-196 late protein L1 gene, complete cds blastn 37500 693 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
11024189 11024189 PRJNA825466_P_NODE_849_length_733_cov_3.845455_g761_i0 PRJNA825466 849 733 3.845455 28.18718515 Betacoronavirus pandemicum 3418604 Viruses Viruses 1354 0   NTclustered gi|2028980905|gb|MZ002360.1| 2697049 g761 i0 100 100 733 0 100 0 1 733 16435 15703 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-LC0038184/2021, complete genome blastn 73300 1354 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
11024192 11024192 PRJNA825466_P_NODE_9149_length_295_cov_2.261261_g9048_i0 PRJNA825466 9149 295 2.261261 6.67071995 Alphapapillomavirus 9 337041 Viruses Viruses 545 1.03e-150   NTclustered gi|2422053041|gb|OP970997.1| 10586 g9048 i0 100 98.3050847457627 295 0 100 0 1 295 2660 2954 Human papillomavirus 33 isolate UC015_LW_V1, complete genome blastn 29000 545 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
11431921 11431921 PRJNA825466_P_NODE_19329_length_249_cov_0.875000_g19228_i0 PRJNA825466 19329 249 0.875 2.17875 Alphapapillomavirus 333750 Viruses Viruses 403 5.3999999999999986e-108   NTclustered gi|403240877|gb|JX556666.1| 10566 g19228 i0 100 67.0441767068273 218 0 100 0 1 218 336 119 Human papillomavirus isolate cu577 E1 gene, partial cds blastn 16694 403 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
11431930 11431930 PRJNA825466_P_NODE_28149_length_241_cov_1.375000_g28048_i0 PRJNA825466 28149 241 1.375 3.31375 Lymphocryptovirus 10375 Viruses Viruses 446 8.519999999999999e-121   NTclustered gi|1862917033|emb|LR812981.1| 10376 g28048 i0 100 100 241 0 100 0 1 241 23586 23346 Human gammaherpesvirus 4 isolate HC-0002 genome assembly, chromosome: EBV blastn 24100 446 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
12299652 12299652 PRJNA825466_P_NODE_3210_length_412_cov_3.569322_g3109_i0 PRJNA825466 3210 412 3.569322 14.70560664 Alphapapillomavirus 9 337041 Viruses Viruses 761 0   NTclustered gi|664698762|gb|KJ675883.1| 10618 g3109 i0 100 100 412 0 100 0 1 412 442 31 Human papillomavirus type 52 isolate HK_WS1236 long control region sequence blastn 41200 761 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
12299663 12299663 PRJNA825466_P_NODE_5270_length_347_cov_2.916058_g5169_i0 PRJNA825466 5270 347 2.916058 10.11872126 Alphapapillomavirus 9 337041 Viruses Viruses 636 7.13e-178   NTclustered gi|1227044160|dbj|LC270094.1| 10598 g5169 i0 99.712 100 347 1 100 0 1 347 35 381 Human papillomavirus type 58 DNA, complete genome, isolate: K1218 blastn 34700 636 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
12299673 12299673 PRJNA825466_P_NODE_7290_length_315_cov_1.272727_g7189_i0 PRJNA825466 7290 315 1.272727 4.00909005 Alphapapillomavirus 6 337050 Viruses Viruses 582 8.459999999999998e-162   NTclustered gi|1898671329|emb|LR862081.1| 37119 g7189 i0 100 35.8761904761905 315 0 100 0 1 315 4900 5214 Human papillomavirus type 66 isolate LNS9786324_HPV66, complete genome blastn 11301 582 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 6
12299679 12299679 PRJNA825466_P_NODE_8270_length_304_cov_4.138528_g8169_i0 PRJNA825466 8270 304 4.138528 12.58112512 Betacoronavirus pandemicum 3418604 Viruses Viruses 562 1.06e-155   NTclustered gi|2028980905|gb|MZ002360.1| 2697049 g8169 i0 100 100 304 0 100 0 1 304 26513 26816 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-LC0038184/2021, complete genome blastn 30400 562 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12707685 12707685 PRJNA825466_P_NODE_10570_length_284_cov_1.345972_g10469_i0 PRJNA825466 10570 284 1.345972 3.82256048 Alphapapillomavirus 333750 Viruses Viruses 525 1.2899999999999994e-144   NTclustered gi|184383|gb|M73258.1|HUMHPVME18 10566 g10469 i0 100 53.8978873239437 284 0 100 0 1 284 1752 1469 Human cellular DNA/Human papillomavirus proviral DNA blastn 15307 525 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
13573948 13573948 PRJNA825466_P_NODE_13071_length_269_cov_1.178571_g12970_i0 PRJNA825466 13071 269 1.178571 3.17035599 Alphapapillomavirus 9 337041 Viruses Viruses 497 2.63e-136   NTclustered gi|1227043593|dbj|LC270031.1| 10618 g12970 i0 100 100 269 0 100 0 1 269 2826 2558 Human papillomavirus type 52 DNA, complete genome, isolate: K1066 blastn 26900 497 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
13573994 13573994 PRJNA825466_P_NODE_231_length_1315_cov_3.048309_g186_i0 PRJNA825466 231 1315 3.048309 40.08526335 Betacoronavirus pandemicum 3418604 Viruses Viruses 2423 0   NTclustered gi|1826681570|gb|MT259226.1| 2697049 g186 i0 99.924 100 1315 1 100 0 1 1315 1320 6 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/CHN/Wuhan_OS52/2020, complete genome blastn 131500 2423 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13981946 13981946 PRJNA825466_P_NODE_15591_length_254_cov_2.176796_g15490_i0 PRJNA825466 15591 254 2.176796 5.52906184 Alphapapillomavirus 333750 Viruses Viruses 470 5.37e-128   NTclustered gi|1162227483|gb|KY502175.1| 10566 g15490 i0 100 100 254 0 100 0 1 254 899 646 Human papillomavirus isolate HPV18 P1 icosahedral capsid protein L2 (L2) gene, partial cds blastn 25400 470 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
13981948 13981948 PRJNA825466_P_NODE_16071_length_252_cov_1.184358_g15970_i0 PRJNA825466 16071 252 1.184358 2.98458216 Alphapapillomavirus 333750 Viruses Viruses 460 3.2e-125   NTclustered gi|2416400472|gb|OP721191.1| 10566 g15970 i0 99.603 100 252 1 100 0 1 252 345 596 MAG: Human papillomavirus isolate LSIL26_seq1 genomic sequence blastn 25200 460 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
13981950 13981950 PRJNA825466_P_NODE_18351_length_250_cov_0.870056_g18250_i0 PRJNA825466 18351 250 0.870056 2.17514 Lymphocryptovirus 10375 Viruses Viruses 462 8.83e-126   NTclustered gi|1862917033|emb|LR812981.1| 10376 g18250 i0 100 101 250 0 100 0 1 250 112819 113068 Human gammaherpesvirus 4 isolate HC-0002 genome assembly, chromosome: EBV blastn 25250 462 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
13981971 13981971 PRJNA825466_P_NODE_3611_length_395_cov_2.493789_g3510_i0 PRJNA825466 3611 395 2.493789 9.85046655 Alphapapillomavirus 333750 Viruses Viruses 730 0   NTclustered gi|1098813|gb|U34153.1|HPU34153 10566 g3510 i0 100 100 395 0 100 0 1 395 1354 960 Human papillomavirus type 16, isolate OR 5428, late minor capsid protein L2 (L2) gene, partial cds blastn 39500 730 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
14848454 14848454 PRJNA825466_P_NODE_13172_length_268_cov_1.579487_g13071_i0 PRJNA825466 13172 268 1.579487 4.23302516 Alphapapillomavirus 9 337041 Viruses Viruses 496 9.429999999999999e-136   NTclustered gi|1897893997|gb|MT752136.1| 10585 g13071 i0 100 100 268 0 100 0 1 268 5210 5477 Human papillomavirus 31 isolate PAP246507, partial genome blastn 26800 496 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
14848495 14848495 PRJNA825466_P_NODE_2312_length_470_cov_1.959698_g2212_i0 PRJNA825466 2312 470 1.959698 9.2105806 Alphapapillomavirus 9 337041 Viruses Viruses 869 0   NTclustered gi|1227043800|dbj|LC270054.1| 10618 g2212 i0 100 99.0957446808511 470 0 100 0 1 470 3710 4179 Human papillomavirus type 52 DNA, complete genome, isolate: TK052 blastn 46575 869 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
14848522 14848522 PRJNA825466_P_NODE_372_length_1069_cov_1.427711_g304_i0 PRJNA825466 372 1069 1.427711 15.26223059 Betacoronavirus pandemicum 3418604 Viruses Viruses 1969 0   NTclustered gi|2113021200|gb|OK499160.1| 2697049 g304 i0 99.906 100 1069 1 100 0 1 1069 19678 20746 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/FL-CDC-ASC210408444/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), and ORF7b (ORF7b) genes, complete cds; ORF8 gene, complete sequence; and nucleocapsid phosphoprotein (N) and ORF10 protein (ORF10) genes, complete cds blastn 106900 1969 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
14848536 14848536 PRJNA825466_P_NODE_772_length_760_cov_2.660844_g687_i0 PRJNA825466 772 760 2.660844 20.2224144 Betacoronavirus pandemicum 3418604 Viruses Viruses 1404 0   NTclustered gi|2160511214|gb|OL739269.1| 2697049 g687 i0 100 100 760 0 100 0 1 760 25545 24786 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/TWN/KMUH-2/2020, complete genome blastn 76000 1404 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
14848538 14848538 PRJNA825466_P_NODE_7812_length_309_cov_3.038136_g7711_i0 PRJNA825466 7812 309 3.038136 9.38784024 Betacoronavirus pandemicum 3418604 Viruses Viruses 571 1.7899999999999995e-158   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g7711 i0 100 100 309 0 100 0 1 309 26064 26372 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 30900 571 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
15256161 15256161 PRJNA825466_P_NODE_20592_length_248_cov_0.880000_g20491_i0 PRJNA825466 20592 248 0.88 2.1824 Lymphocryptovirus 10375 Viruses Viruses 459 1.13e-124   NTclustered gi|1862917033|emb|LR812981.1| 10376 g20491 i0 100 100 248 0 100 0 1 248 114431 114184 Human gammaherpesvirus 4 isolate HC-0002 genome assembly, chromosome: EBV blastn 24800 459 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
16122990 16122990 PRJNA825466_P_NODE_1153_length_641_cov_2.330986_g1057_i0 PRJNA825466 1153 641 2.330986 14.94162026 Betacoronavirus pandemicum 3418604 Viruses Viruses 1181 0   NTclustered gi|2504372624|gb|OQ974494.1| 2697049 g1057 i0 100 99.6911076443058 639 0 99 0 3 641 4225 4863 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/B09229/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds blastn 63902 1181 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
16123072 16123072 PRJNA825466_P_NODE_93_length_1909_cov_2.651416_g72_i0 PRJNA825466 93 1909 2.651416 50.61553144 Betacoronavirus pandemicum 3418604 Viruses Viruses 3504 0   NTclustered gi|2054232605|emb|OU182279.1| 2697049 g72 i0 99.79 100 1909 4 100 0 1 1909 27113 29021 Severe acute respiratory syndrome coronavirus 2 isolate hCoV-19/Iceland/1507/2020 genome assembly, chromosome: hCoV-19_Iceland_1507_2020 blastn 190900 3504 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
16123074 16123074 PRJNA825466_P_NODE_953_length_698_cov_2.136000_g862_i0 PRJNA825466 953 698 2.136 14.90928 Alphapapillomavirus 7 337042 Viruses Viruses 1290 0   NTclustered gi|1836651249|dbj|LC509006.1| 333761 g862 i0 100 100 698 0 100 0 1 698 4868 4171 Human papillomavirus type 18 K1872 DNA, complete genome blastn 69800 1290 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 7
17398746 17398746 PRJNA825466_P_NODE_15434_length_255_cov_2.505495_g15333_i0 PRJNA825466 15434 255 2.505495 6.38901225 Alphapapillomavirus 9 337041 Viruses Viruses 472 1.5e-128   NTclustered gi|664698762|gb|KJ675883.1| 10618 g15333 i0 100 100 255 0 100 0 1 255 719 465 Human papillomavirus type 52 isolate HK_WS1236 long control region sequence blastn 25500 472 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
17398815 17398815 PRJNA825466_P_NODE_4594_length_363_cov_1.924138_g4493_i0 PRJNA825466 4594 363 1.924138 6.98462094 Alphapapillomavirus 9 337041 Viruses Viruses 671 0   NTclustered gi|337238198|gb|HQ537698.1| 10586 g4493 i0 100 80.7245179063361 363 0 100 0 1 363 1820 2182 Human papillomavirus type 33 isolate Qv34060, complete genome blastn 29303 671 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
17398821 17398821 PRJNA825466_P_NODE_654_length_827_cov_2.208223_g573_i0 PRJNA825466 654 827 2.208223 18.26200421 Betacoronavirus pandemicum 3418604 Viruses Viruses 1517 0   NTclustered gi|2453877168|emb|OX443998.1| 2697049 g573 i0 99.758 103.785973397823 827 2 100 0 1 827 22329 21503 Severe acute respiratory syndrome coronavirus 2 isolate 18208598 genome assembly, complete genome: monopartite blastn 85831 1517 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
17805660 17805660 PRJNA825466_P_NODE_1114_length_650_cov_4.951473_g1018_i0 PRJNA825466 1114 650 4.951473 32.1845745 Orthorubulavirus 2560195 Viruses Viruses 1118 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g1018 i0 97.846 84.4769230769231 650 8 99 5 4 650 5805 6451 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 54910 1118 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
18671720 18671720 PRJNA825466_P_NODE_1155_length_641_cov_2.007042_g1059_i0 PRJNA825466 1155 641 2.007042 12.86513922 Betacoronavirus pandemicum 3418604 Viruses Viruses 1157 0   NTclustered gi|2241599185|emb|OW826095.1| 2697049 g1059 i0 99.22 100 641 5 100 0 1 641 7001 6361 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 64100 1157 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
18671742 18671742 PRJNA825466_P_NODE_16215_length_251_cov_1.308989_g16114_i0 PRJNA825466 16215 251 1.308989 3.28556239 Alphapapillomavirus 9 337041 Viruses Viruses 459 1.1499999999999996e-124   NTclustered gi|217316601|gb|FJ407199.1| 10598 g16114 i0 99.602 99.99203187251 251 1 100 0 1 251 1600 1850 Human papillomavirus type 58 isolate HPV58SC129 E1 protein gene, partial cds; E2 protein, E4 protein, E5 protein, L2 protein, L1 protein, E6 protein, and E7 protein genes, complete cds; and E1 protein gene, partial cds blastn 25098 459 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
18671749 18671749 PRJNA825466_P_NODE_17755_length_250_cov_0.870056_g17654_i0 PRJNA825466 17755 250 0.870056 2.17514 Alphapapillomavirus 7 337042 Viruses Viruses 435 1.92e-117   NTclustered gi|2330733543|gb|OP684039.1| 333761 g17654 i0 98 99.936 250 5 100 0 1 250 254 503 Human papillomavirus 18 isolate 18HNL12 late major capsid protein L1 (L1) gene, complete cds blastn 24984 435 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 7
18671750 18671750 PRJNA825466_P_NODE_1795_length_523_cov_2.833333_g1696_i0 PRJNA825466 1795 523 2.833333 14.81833159 Betacoronavirus pandemicum 3418604 Viruses Viruses 966 0   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g1696 i0 100 100 523 0 100 0 1 523 5418 4896 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 52300 966 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
18671785 18671785 PRJNA825466_P_NODE_455_length_970_cov_2.659978_g380_i0 PRJNA825466 455 970 2.659978 25.8017866 Betacoronavirus pandemicum 3418604 Viruses Viruses 1792 0   NTclustered gi|2523306575|emb|OX913992.1| 2697049 g380 i0 100 100 970 0 100 0 1 970 23809 22840 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 97000 1792 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
19079792 19079792 PRJNA825466_P_NODE_955_length_697_cov_2.304487_g863_i0 PRJNA825466 955 697 2.304487 16.06227439 Orthorubulavirus 2560195 Viruses Viruses 1256 0   NTclustered gi|146351838|gb|EF543648.1| 149595 g863 i0 99.281 70.2338593974175 695 5 99 0 3 697 1596 902 Canine parainfluenza virus strain FA nucleocapsid (N) gene, complete cds blastn 48953 1256 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Canine parainfluenza virus
19946942 19946942 PRJNA825466_P_NODE_1176_length_634_cov_1.871658_g1080_i0 PRJNA825466 1176 634 1.871658 11.86631172 Alphapapillomavirus 9 337041 Viruses Viruses 915 0   NTclustered gi|1227043593|dbj|LC270031.1| 10618 g1080 i0 93.659 102.104100946372 615 33 100 3 26 634 5284 5898 Human papillomavirus type 52 DNA, complete genome, isolate: K1066 blastn 64734 915 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
19946951 19946951 PRJNA825466_P_NODE_14036_length_263_cov_4.531579_g13935_i0 PRJNA825466 14036 263 4.531579 11.91805277 Betacoronavirus pandemicum 3418604 Viruses Viruses 486 5.5499999999999986e-133   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g13935 i0 100 100 263 0 100 0 1 263 6100 6362 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 26300 486 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
19946961 19946961 PRJNA825466_P_NODE_1616_length_546_cov_3.059197_g1518_i0 PRJNA825466 1616 546 3.059197 16.70321562 Betacoronavirus pandemicum 3418604 Viruses Viruses 1009 0   NTclustered gi|2028980905|gb|MZ002360.1| 2697049 g1518 i0 100 100 546 0 100 0 1 546 15166 15711 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-LC0038184/2021, complete genome blastn 54600 1009 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
19947004 19947004 PRJNA825466_P_NODE_2736_length_438_cov_2.002740_g2635_i0 PRJNA825466 2736 438 2.00274 8.7720012 Alphapapillomavirus 9 337041 Viruses Viruses 804 0   NTclustered gi|337238189|gb|HQ537697.1| 10586 g2635 i0 99.772 95.310502283105 438 1 100 0 1 438 1626 1189 Human papillomavirus type 33 isolate AS099, complete genome blastn 41746 804 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
20354518 20354518 PRJNA825466_P_NODE_456_length_970_cov_2.022297_g381_i0 PRJNA825466 456 970 2.022297 19.6162809 Alphapapillomavirus 333750 Viruses Viruses 1775 0   NTclustered gi|1162227033|gb|KY501965.1| 10566 g381 i0 99.691 100 970 3 100 0 1 970 377 1346 Human papillomavirus isolate HPV18 P1 replication protein E1 (E1) gene, partial cds blastn 97000 1786 0.993840985442329 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
21222457 21222457 PRJNA825466_P_NODE_15897_length_253_cov_1.122222_g15796_i0 PRJNA825466 15897 253 1.122222 2.83922166 Betacoronavirus pandemicum 3418604 Viruses Viruses 468 1.92e-127   NTclustered gi|2103422285|emb|OU727096.1| 2697049 g15796 i0 100 100 253 0 100 0 1 253 29213 28961 Severe acute respiratory syndrome coronavirus 2 isolate hCoV-19/Switzerland/JU-UHB-43039536/2021 genome assembly, chromosome: 1 blastn 25300 468 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
21222466 21222466 PRJNA825466_P_NODE_2057_length_492_cov_2.145585_g1957_i0 PRJNA825466 2057 492 2.145585 10.5562782 Alphapapillomavirus 6 337050 Viruses Viruses 909 0   NTclustered gi|1898671329|emb|LR862081.1| 37119 g1957 i0 100 86.0345528455285 492 0 100 0 1 492 5347 5838 Human papillomavirus type 66 isolate LNS9786324_HPV66, complete genome blastn 42329 909 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 6
21222517 21222517 PRJNA825466_P_NODE_897_length_714_cov_2.324493_g807_i0 PRJNA825466 897 714 2.324493 16.59688002 Betacoronavirus pandemicum 3418604 Viruses Viruses 1319 0   NTclustered gi|2028980905|gb|MZ002360.1| 2697049 g807 i0 100 100 714 0 100 0 1 714 12962 13675 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-LC0038184/2021, complete genome blastn 71400 1319 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
21630125 21630125 PRJNA825466_P_NODE_10797_length_283_cov_1.028571_g10696_i0 PRJNA825466 10797 283 1.028571 2.91085593 Lymphocryptovirus 10375 Viruses Viruses 512 9.97e-141   NTclustered gi|1519305892|dbj|AP019128.1| 10376 g10696 i0 99.293 101 283 2 100 0 1 283 151862 151580 Human gammaherpesvirus 4 UPN326_PBMC DNA, nearly complete genome blastn 28583 512 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
22497149 22497149 PRJNA825466_P_NODE_14798_length_259_cov_1.301075_g14697_i0 PRJNA825466 14798 259 1.301075 3.36978425 Betacoronavirus pandemicum 3418604 Viruses Viruses 473 4.25e-129   NTclustered gi|2028980905|gb|MZ002360.1| 2697049 g14697 i0 99.614 100 259 1 100 0 1 259 22550 22292 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-LC0038184/2021, complete genome blastn 25900 473 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
22497150 22497150 PRJNA825466_P_NODE_14838_length_259_cov_1.236559_g14737_i0 PRJNA825466 14838 259 1.236559 3.20268781 Betacoronavirus pandemicum 3418604 Viruses Viruses 479 9.13e-131   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g14737 i0 100 100 259 0 100 0 1 259 7778 7520 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 25900 479 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
22497152 22497152 PRJNA825466_P_NODE_1718_length_532_cov_2.583878_g1619_i0 PRJNA825466 1718 532 2.583878 13.74623096 Betacoronavirus pandemicum 3418604 Viruses Viruses 983 0   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g1619 i0 100 100 532 0 100 0 1 532 10702 10171 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 53200 983 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
22497201 22497201 PRJNA825466_P_NODE_3098_length_417_cov_1.244186_g2997_i0 PRJNA825466 3098 417 1.244186 5.18825562 Alphapapillomavirus 6 337050 Viruses Viruses 760 0   NTclustered gi|1898669483|emb|LR861851.1| 37119 g2997 i0 99.52 93.5707434052758 417 2 100 0 1 417 955 539 Human papillomavirus type 66 isolate LNS2720744_HPV66, complete genome blastn 39019 760 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 6
22497215 22497215 PRJNA825466_P_NODE_7258_length_315_cov_3.181818_g7157_i0 PRJNA825466 7258 315 3.181818 10.0227267 Alphapapillomavirus 9 337041 Viruses Viruses 582 8.459999999999998e-162   NTclustered gi|1227043593|dbj|LC270031.1| 10618 g7157 i0 100 100 315 0 100 0 1 315 5041 4727 Human papillomavirus type 52 DNA, complete genome, isolate: K1066 blastn 31500 582 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
22905694 22905694 PRJNA825466_P_NODE_5238_length_348_cov_1.120000_g5137_i0 PRJNA825466 5238 348 1.12 3.8976 root 1 Root_unresolved Root_unresolved 643 4.279999999999998e-180   NTclustered gi|2288721861|gb|OP218818.1| 10535 g5137 i0 100 100.086206896552 348 0 100 0 1 348 1408 1061 Unidentified adenovirus strain CHOP Ad5 blastn 34830 643 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
23772842 23772842 PRJNA825466_P_NODE_179_length_1487_cov_3.049505_g141_i0 PRJNA825466 179 1487 3.049505 45.34613935 Betacoronavirus pandemicum 3418604 Viruses Viruses 2747 0   NTclustered gi|2057772748|emb|OU240649.1| 2697049 g141 i0 100 100 1487 0 100 0 1 1487 9666 8180 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 148700 2747 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
23772873 23772873 PRJNA825466_P_NODE_319_length_1138_cov_2.790610_g255_i0 PRJNA825466 319 1138 2.79061 31.7571418 Betacoronavirus pandemicum 3418604 Viruses Viruses 2097 0   NTclustered gi|2190424604|gb|OM565997.1| 2697049 g255 i0 99.912 100 1138 1 100 0 1 1138 16560 17697 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-CDC-ASC210538513/2022 ORF1ab polyprotein (ORF1ab) and ORF1a polyprotein (ORF1ab) genes, partial cds; and surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds blastn 113800 2097 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
24179791 24179791 PRJNA825466_P_NODE_4979_length_354_cov_1.064057_g4878_i0 PRJNA825466 4979 354 1.064057 3.76676178 Lymphocryptovirus 10375 Viruses Viruses 641 1.5599999999999998e-179   NTclustered gi|2086089088|gb|MT648653.1| 10376 g4878 i0 100 98.0254237288136 347 0 98 0 8 354 48655 49001 Human gammaherpesvirus 4 isolate Necker-12, partial genome blastn 34701 641 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
24179794 24179794 PRJNA825466_P_NODE_5719_length_338_cov_13.422642_g5618_i0 PRJNA825466 5719 338 13.422642 45.36852996 Orthorubulavirus 2560195 Viruses Viruses 577 4.259999999999999e-160   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g5618 i0 98.765 77.6242603550296 324 4 96 0 5 328 2112 1789 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 26237 577 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
25046709 25046709 PRJNA825466_P_NODE_13640_length_266_cov_0.917098_g13539_i0 PRJNA825466 13640 266 0.917098 2.43948068 Betacoronavirus pandemicum 3418604 Viruses Viruses 464 2.64e-126   NTclustered gi|2892074031|gb|PQ981157.1| 2697049 g13539 i0 98.12 100 266 5 100 0 1 266 26315 26580 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/FRA/21082240639/2021 ORF1ab polyprotein (ORF1ab) and ORF1a polyprotein (ORF1ab) genes, partial cds; and surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds blastn 26600 464 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
25046727 25046727 PRJNA825466_P_NODE_1740_length_529_cov_1.675439_g1641_i0 PRJNA825466 1740 529 1.675439 8.86307231 Betacoronavirus pandemicum 3418604 Viruses Viruses 977 0   NTclustered gi|2028980905|gb|MZ002360.1| 2697049 g1641 i0 100 100 529 0 100 0 1 529 24392 23864 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-LC0038184/2021, complete genome blastn 52900 977 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
25046749 25046749 PRJNA825466_P_NODE_240_length_1287_cov_2.767710_g192_i0 PRJNA825466 240 1287 2.76771 35.6204277 Betacoronavirus pandemicum 3418604 Viruses Viruses 2377 0   NTclustered gi|2200613490|gb|OM853158.1| 2697049 g192 i0 100 100 1287 0 100 0 1 1287 19514 18228 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/TN-CDC-ASC210555134/2022, complete genome blastn 128700 2377 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
25046776 25046776 PRJNA825466_P_NODE_380_length_1063_cov_2.271717_g311_i0 PRJNA825466 380 1063 2.271717 24.14835171 Betacoronavirus pandemicum 3418604 Viruses Viruses 1964 0   NTclustered gi|2089843528|emb|OU594278.1| 2697049 g311 i0 100 100 1063 0 100 0 1 1063 11751 12813 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 106300 1964 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
25046785 25046785 PRJNA825466_P_NODE_5980_length_334_cov_1.724138_g5879_i0 PRJNA825466 5980 334 1.724138 5.75862092 Alphapapillomavirus 9 337041 Viruses Viruses 612 1.15e-170   NTclustered gi|1227044160|dbj|LC270094.1| 10598 g5879 i0 99.701 99.997005988024 334 1 100 0 1 334 7421 7088 Human papillomavirus type 58 DNA, complete genome, isolate: K1218 blastn 33399 612 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
25046792 25046792 PRJNA825466_P_NODE_7540_length_312_cov_1.251046_g7439_i0 PRJNA825466 7540 312 1.251046 3.90326352 Alphapapillomavirus 9 337041 Viruses Viruses 566 8.429999999999998e-157   NTclustered gi|1227043593|dbj|LC270031.1| 10618 g7439 i0 99.359 99.9935897435897 312 2 100 0 1 312 795 1106 Human papillomavirus type 52 DNA, complete genome, isolate: K1066 blastn 31198 566 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 9
25046808 25046808 PRJNA825466_P_NODE_9980_length_288_cov_2.469767_g9879_i0 PRJNA825466 9980 288 2.469767 7.11292896 Betacoronavirus pandemicum 3418604 Viruses Viruses 532 7.8e-147   NTclustered gi|2099506492|gb|OK254697.1| 2697049 g9879 i0 100 100 288 0 100 0 1 288 5664 5951 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/UT-UPHL-210921774045/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), and ORF7b (ORF7b) genes, complete cds; ORF8 gene, complete sequence; and nucleocapsid phosphoprotein (N) and ORF10 protein (ORF10) genes, complete cds blastn 28800 532 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
25454732 25454732 PRJNA825466_P_NODE_12060_length_275_cov_1.084158_g11959_i0 PRJNA825466 12060 275 1.084158 2.9814345 Lymphocryptovirus 10375 Viruses Viruses 508 1.2499999999999999e-139   NTclustered gi|1862917033|emb|LR812981.1| 10376 g11959 i0 100 100 275 0 100 0 1 275 31223 30949 Human gammaherpesvirus 4 isolate HC-0002 genome assembly, chromosome: EBV blastn 27500 508 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;