RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA825466" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA825466 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
820462 820462 PRJNA825466_P_NODE_3941_length_383_cov_0.993548_g3840_i0 PRJNA825466 3941 383 0.993548 3.80528884 Diplorchis hangzhouensis 1131906 Platyhelminthes Platyhelminthes 54.7 0.01   NTclustered gi|379771686|gb|JQ038227.1| 1131906 g3840 i0 100 0.0757180156657963 29 0 8 0 218 246 5361 5389 Diplorchis hangzhouensis mitochondrion sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Polystomatidea Polystomatidae Diplorchis Diplorchis hangzhouensis
8473370 8473370 PRJNA825466_P_NODE_5207_length_348_cov_5.320000_g5106_i0 PRJNA825466 5207 348 5.32 18.5136 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 62.1 5.48e-5   NTclustered gi|687189247|emb|LN182460.1| 99802 g5106 i0 97.222 2.55747126436782 36 1 10 0 310 345 472 507 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0159298 blastn 890 62.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;