RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA825466" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA825466 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3371252 3371252 PRJNA825466_P_NODE_20003_length_248_cov_0.880000_g19902_i0 PRJNA825466 20003 248 0.88 2.1824 Rhizomucor pusillus 4840 Fungi Fungi 459 1.13e-124   NTclustered gi|2837734056|ref|XM_069388919.1| 4840 g19902 i0 100 1 248 0 100 0 1 248 320 567 Rhizomucor pusillus uncharacterized protein (VTP01DRAFT_9669), partial mRNA blastn 248 459 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
7198558 7198558 PRJNA825466_P_NODE_14126_length_263_cov_1.326316_g14025_i0 PRJNA825466 14126 263 1.326316 3.48821108 Halteromyces radiatus 101107 Fungi Fungi 202 2.25e-47   NTclustered gi|2323747311|ref|XM_051542342.1| 101107 g14025 i0 80.934 69.9201520912547 257 47 97 2 4 259 2007 2262 Halteromyces radiatus elongation factor 2 (BX664DRAFT_300480), partial mRNA blastn 18389 202 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
11431927 11431927 PRJNA825466_P_NODE_24809_length_244_cov_0.900585_g24708_i0 PRJNA825466 24809 244 0.900585 2.1974274 Gigaspora 4873 Fungi Fungi 259 1.21e-64   NTclustered gi|530339809|gb|KC666029.1| 4874 g24708 i0 86.066 99.9959016393443 244 30 98 4 1 240 579 336 Gigaspora margarita isolate WDG47 18S ribosomal RNA gene, partial sequence blastn 24399 259 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
12299683 12299683 PRJNA825466_P_NODE_890_length_716_cov_1.978227_g801_i0 PRJNA825466 890 716 1.978227 14.164105320000001 Gilbertella persicaria 101096 Fungi Fungi 54.7 0.02   NTclustered gi|2323760233|ref|XM_051583203.1| 101096 g801 i0 96.875 0.0446927374301676 32 1 4 0 657 688 1618 1649 Gilbertella persicaria uncharacterized protein (B0P05DRAFT_599395), mRNA blastn 32 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;