contig_metadata
39 rows where analysis = "blastn", bioproject = "PRJNA825466" and tax_phylum = "Cossaviricota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 820430 | 820430 | PRJNA825466_P_NODE_2141_length_483_cov_1.790244_g2041_i0 | PRJNA825466 | 2141 | 483 | 1.790244 | 8.64687852 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 893 | 0 | NTclustered | gi|1227043593|dbj|LC270031.1| | 10618 | g2041 | i0 | 100 | 100 | 483 | 0 | 100 | 0 | 1 | 483 | 2586 | 2104 | Human papillomavirus type 52 DNA, complete genome, isolate: K1066 | blastn | 48300 | 893 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 820453 | 820453 | PRJNA825466_P_NODE_29341_length_239_cov_3.861446_g29240_i0 | PRJNA825466 | 29341 | 239 | 3.861446 | 9.22885594 | Alphapapillomavirus 7 | 337042 | Viruses | Viruses | 442 | 1.0899999999999994e-119 | NTclustered | gi|2733486694|gb|PP781984.1| | 333761 | g29240 | i0 | 100 | 100 | 239 | 0 | 100 | 0 | 1 | 239 | 3939 | 4177 | Human papillomavirus 18 isolate InDRE-121Mex/Mexico/2023, complete genome | blastn | 23900 | 442 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 7 | ||
| 820466 | 820466 | PRJNA825466_P_NODE_4601_length_363_cov_1.400000_g4500_i0 | PRJNA825466 | 4601 | 363 | 1.4 | 5.082 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 665 | 0 | NTclustered | gi|217316703|gb|FJ407211.1| | 10598 | g4500 | i0 | 99.725 | 100 | 363 | 1 | 100 | 0 | 1 | 363 | 3198 | 3560 | Human papillomavirus type 58 isolate HPV58SC79 E6 protein and E7 protein genes, complete cds; E1 protein genes, partial cds; E2 protein, E4 protein, and E5 protein genes, complete cds; and L2 protein gene, partial cds | blastn | 36300 | 665 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 820479 | 820479 | PRJNA825466_P_NODE_701_length_800_cov_3.532325_g619_i0 | PRJNA825466 | 701 | 800 | 3.532325 | 28.2586 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 1478 | 0 | NTclustered | gi|2065708512|gb|MZ374431.1| | 10618 | g619 | i0 | 100 | 99.99875 | 800 | 0 | 100 | 0 | 1 | 800 | 2082 | 1283 | Human papillomavirus 52 isolate PAP2912, complete genome | blastn | 79999 | 1478 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 2095958 | 2095958 | PRJNA825466_P_NODE_2102_length_488_cov_0.809639_g2002_i0 | PRJNA825466 | 2102 | 488 | 0.809639 | 3.95103832 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 889 | 0 | NTclustered | gi|2513092531|gb|OP900893.1| | 10586 | g2002 | i0 | 99.589 | 99.3627049180328 | 487 | 2 | 99 | 0 | 2 | 488 | 967 | 481 | Human papillomavirus 33 isolate 33L2CHN297 late protein L2 (L2) gene, complete cds | blastn | 48489 | 889 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 2095961 | 2095961 | PRJNA825466_P_NODE_2162_length_481_cov_2.647059_g2062_i0 | PRJNA825466 | 2162 | 481 | 2.647059 | 12.73235379 | Alphapapillomavirus 7 | 337042 | Viruses | Viruses | 889 | 0 | NTclustered | gi|2733486694|gb|PP781984.1| | 333761 | g2062 | i0 | 100 | 100 | 481 | 0 | 100 | 0 | 1 | 481 | 2253 | 2733 | Human papillomavirus 18 isolate InDRE-121Mex/Mexico/2023, complete genome | blastn | 48100 | 889 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 7 | ||
| 4648792 | 4648792 | PRJNA825466_P_NODE_1504_length_563_cov_2.744898_g1407_i0 | PRJNA825466 | 1504 | 563 | 2.744898 | 15.45377574 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 791 | 0 | NTclustered | gi|1227044160|dbj|LC270094.1| | 10598 | g1407 | i0 | 92.74 | 97.7424511545293 | 551 | 34 | 98 | 2 | 1 | 551 | 5322 | 5866 | Human papillomavirus type 58 DNA, complete genome, isolate: K1218 | blastn | 55029 | 791 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 5923631 | 5923631 | PRJNA825466_P_NODE_11965_length_275_cov_1.470297_g11864_i0 | PRJNA825466 | 11965 | 275 | 1.470297 | 4.04331675 | Alphapapillomavirus 6 | 337050 | Viruses | Viruses | 497 | 2.7e-136 | NTclustered | gi|1898671329|emb|LR862081.1| | 37119 | g11864 | i0 | 99.273 | 79.6690909090909 | 275 | 2 | 100 | 0 | 1 | 275 | 7206 | 7480 | Human papillomavirus type 66 isolate LNS9786324_HPV66, complete genome | blastn | 21909 | 497 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 6 | ||
| 5923635 | 5923635 | PRJNA825466_P_NODE_12825_length_270_cov_1.954315_g12724_i0 | PRJNA825466 | 12825 | 270 | 1.954315 | 5.2766505 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 494 | 3.4199999999999996e-135 | NTclustered | gi|2065708512|gb|MZ374431.1| | 10618 | g12724 | i0 | 100 | 98.8888888888889 | 267 | 0 | 99 | 0 | 4 | 270 | 2988 | 3254 | Human papillomavirus 52 isolate PAP2912, complete genome | blastn | 26700 | 494 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 7198618 | 7198618 | PRJNA825466_P_NODE_8846_length_298_cov_2.355556_g8745_i0 | PRJNA825466 | 8846 | 298 | 2.355556 | 7.01955688 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 470 | 6.449999999999999e-128 | NTclustered | gi|217316703|gb|FJ407211.1| | 10598 | g8745 | i0 | 100 | 102.040268456376 | 254 | 0 | 100 | 0 | 1 | 254 | 4217 | 4470 | Human papillomavirus type 58 isolate HPV58SC79 E6 protein and E7 protein genes, complete cds; E1 protein genes, partial cds; E2 protein, E4 protein, and E5 protein genes, complete cds; and L2 protein gene, partial cds | blastn | 30408 | 470 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 8473319 | 8473319 | PRJNA825466_P_NODE_1707_length_534_cov_1.631236_g1608_i0 | PRJNA825466 | 1707 | 534 | 1.631236 | 8.71080024 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 976 | 0 | NTclustered | gi|1227044160|dbj|LC270094.1| | 10598 | g1608 | i0 | 99.625 | 100 | 534 | 2 | 100 | 0 | 1 | 534 | 4694 | 5227 | Human papillomavirus type 58 DNA, complete genome, isolate: K1218 | blastn | 53400 | 976 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 9748428 | 9748428 | PRJNA825466_P_NODE_1588_length_550_cov_1.922432_g1490_i0 | PRJNA825466 | 1588 | 550 | 1.922432 | 10.573376 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 994 | 0 | NTclustered | gi|1227043593|dbj|LC270031.1| | 10618 | g1490 | i0 | 99.815 | 98.3636363636364 | 541 | 1 | 98 | 0 | 1 | 541 | 541 | 1 | Human papillomavirus type 52 DNA, complete genome, isolate: K1066 | blastn | 54100 | 994 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 11024174 | 11024174 | PRJNA825466_P_NODE_4169_length_375_cov_2.612583_g4068_i0 | PRJNA825466 | 4169 | 375 | 2.612583 | 9.79718625 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 693 | 0 | NTclustered | gi|2318781025|gb|ON381707.1| | 10618 | g4068 | i0 | 100 | 100 | 375 | 0 | 100 | 0 | 1 | 375 | 986 | 612 | Human papillomavirus 52 isolate HPV52-L1-LYY-SH-196 late protein L1 gene, complete cds | blastn | 37500 | 693 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 11024192 | 11024192 | PRJNA825466_P_NODE_9149_length_295_cov_2.261261_g9048_i0 | PRJNA825466 | 9149 | 295 | 2.261261 | 6.67071995 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 545 | 1.03e-150 | NTclustered | gi|2422053041|gb|OP970997.1| | 10586 | g9048 | i0 | 100 | 98.3050847457627 | 295 | 0 | 100 | 0 | 1 | 295 | 2660 | 2954 | Human papillomavirus 33 isolate UC015_LW_V1, complete genome | blastn | 29000 | 545 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 11431921 | 11431921 | PRJNA825466_P_NODE_19329_length_249_cov_0.875000_g19228_i0 | PRJNA825466 | 19329 | 249 | 0.875 | 2.17875 | Alphapapillomavirus | 333750 | Viruses | Viruses | 403 | 5.3999999999999986e-108 | NTclustered | gi|403240877|gb|JX556666.1| | 10566 | g19228 | i0 | 100 | 67.0441767068273 | 218 | 0 | 100 | 0 | 1 | 218 | 336 | 119 | Human papillomavirus isolate cu577 E1 gene, partial cds | blastn | 16694 | 403 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 12299652 | 12299652 | PRJNA825466_P_NODE_3210_length_412_cov_3.569322_g3109_i0 | PRJNA825466 | 3210 | 412 | 3.569322 | 14.70560664 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 761 | 0 | NTclustered | gi|664698762|gb|KJ675883.1| | 10618 | g3109 | i0 | 100 | 100 | 412 | 0 | 100 | 0 | 1 | 412 | 442 | 31 | Human papillomavirus type 52 isolate HK_WS1236 long control region sequence | blastn | 41200 | 761 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 12299663 | 12299663 | PRJNA825466_P_NODE_5270_length_347_cov_2.916058_g5169_i0 | PRJNA825466 | 5270 | 347 | 2.916058 | 10.11872126 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 636 | 7.13e-178 | NTclustered | gi|1227044160|dbj|LC270094.1| | 10598 | g5169 | i0 | 99.712 | 100 | 347 | 1 | 100 | 0 | 1 | 347 | 35 | 381 | Human papillomavirus type 58 DNA, complete genome, isolate: K1218 | blastn | 34700 | 636 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 12299673 | 12299673 | PRJNA825466_P_NODE_7290_length_315_cov_1.272727_g7189_i0 | PRJNA825466 | 7290 | 315 | 1.272727 | 4.00909005 | Alphapapillomavirus 6 | 337050 | Viruses | Viruses | 582 | 8.459999999999998e-162 | NTclustered | gi|1898671329|emb|LR862081.1| | 37119 | g7189 | i0 | 100 | 35.8761904761905 | 315 | 0 | 100 | 0 | 1 | 315 | 4900 | 5214 | Human papillomavirus type 66 isolate LNS9786324_HPV66, complete genome | blastn | 11301 | 582 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 6 | ||
| 12707685 | 12707685 | PRJNA825466_P_NODE_10570_length_284_cov_1.345972_g10469_i0 | PRJNA825466 | 10570 | 284 | 1.345972 | 3.82256048 | Alphapapillomavirus | 333750 | Viruses | Viruses | 525 | 1.2899999999999994e-144 | NTclustered | gi|184383|gb|M73258.1|HUMHPVME18 | 10566 | g10469 | i0 | 100 | 53.8978873239437 | 284 | 0 | 100 | 0 | 1 | 284 | 1752 | 1469 | Human cellular DNA/Human papillomavirus proviral DNA | blastn | 15307 | 525 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 13573948 | 13573948 | PRJNA825466_P_NODE_13071_length_269_cov_1.178571_g12970_i0 | PRJNA825466 | 13071 | 269 | 1.178571 | 3.17035599 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 497 | 2.63e-136 | NTclustered | gi|1227043593|dbj|LC270031.1| | 10618 | g12970 | i0 | 100 | 100 | 269 | 0 | 100 | 0 | 1 | 269 | 2826 | 2558 | Human papillomavirus type 52 DNA, complete genome, isolate: K1066 | blastn | 26900 | 497 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 13981946 | 13981946 | PRJNA825466_P_NODE_15591_length_254_cov_2.176796_g15490_i0 | PRJNA825466 | 15591 | 254 | 2.176796 | 5.52906184 | Alphapapillomavirus | 333750 | Viruses | Viruses | 470 | 5.37e-128 | NTclustered | gi|1162227483|gb|KY502175.1| | 10566 | g15490 | i0 | 100 | 100 | 254 | 0 | 100 | 0 | 1 | 254 | 899 | 646 | Human papillomavirus isolate HPV18 P1 icosahedral capsid protein L2 (L2) gene, partial cds | blastn | 25400 | 470 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 13981948 | 13981948 | PRJNA825466_P_NODE_16071_length_252_cov_1.184358_g15970_i0 | PRJNA825466 | 16071 | 252 | 1.184358 | 2.98458216 | Alphapapillomavirus | 333750 | Viruses | Viruses | 460 | 3.2e-125 | NTclustered | gi|2416400472|gb|OP721191.1| | 10566 | g15970 | i0 | 99.603 | 100 | 252 | 1 | 100 | 0 | 1 | 252 | 345 | 596 | MAG: Human papillomavirus isolate LSIL26_seq1 genomic sequence | blastn | 25200 | 460 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 13981971 | 13981971 | PRJNA825466_P_NODE_3611_length_395_cov_2.493789_g3510_i0 | PRJNA825466 | 3611 | 395 | 2.493789 | 9.85046655 | Alphapapillomavirus | 333750 | Viruses | Viruses | 730 | 0 | NTclustered | gi|1098813|gb|U34153.1|HPU34153 | 10566 | g3510 | i0 | 100 | 100 | 395 | 0 | 100 | 0 | 1 | 395 | 1354 | 960 | Human papillomavirus type 16, isolate OR 5428, late minor capsid protein L2 (L2) gene, partial cds | blastn | 39500 | 730 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 14848454 | 14848454 | PRJNA825466_P_NODE_13172_length_268_cov_1.579487_g13071_i0 | PRJNA825466 | 13172 | 268 | 1.579487 | 4.23302516 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 496 | 9.429999999999999e-136 | NTclustered | gi|1897893997|gb|MT752136.1| | 10585 | g13071 | i0 | 100 | 100 | 268 | 0 | 100 | 0 | 1 | 268 | 5210 | 5477 | Human papillomavirus 31 isolate PAP246507, partial genome | blastn | 26800 | 496 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 14848495 | 14848495 | PRJNA825466_P_NODE_2312_length_470_cov_1.959698_g2212_i0 | PRJNA825466 | 2312 | 470 | 1.959698 | 9.2105806 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 869 | 0 | NTclustered | gi|1227043800|dbj|LC270054.1| | 10618 | g2212 | i0 | 100 | 99.0957446808511 | 470 | 0 | 100 | 0 | 1 | 470 | 3710 | 4179 | Human papillomavirus type 52 DNA, complete genome, isolate: TK052 | blastn | 46575 | 869 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 16123074 | 16123074 | PRJNA825466_P_NODE_953_length_698_cov_2.136000_g862_i0 | PRJNA825466 | 953 | 698 | 2.136 | 14.90928 | Alphapapillomavirus 7 | 337042 | Viruses | Viruses | 1290 | 0 | NTclustered | gi|1836651249|dbj|LC509006.1| | 333761 | g862 | i0 | 100 | 100 | 698 | 0 | 100 | 0 | 1 | 698 | 4868 | 4171 | Human papillomavirus type 18 K1872 DNA, complete genome | blastn | 69800 | 1290 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 7 | ||
| 17398746 | 17398746 | PRJNA825466_P_NODE_15434_length_255_cov_2.505495_g15333_i0 | PRJNA825466 | 15434 | 255 | 2.505495 | 6.38901225 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 472 | 1.5e-128 | NTclustered | gi|664698762|gb|KJ675883.1| | 10618 | g15333 | i0 | 100 | 100 | 255 | 0 | 100 | 0 | 1 | 255 | 719 | 465 | Human papillomavirus type 52 isolate HK_WS1236 long control region sequence | blastn | 25500 | 472 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 17398815 | 17398815 | PRJNA825466_P_NODE_4594_length_363_cov_1.924138_g4493_i0 | PRJNA825466 | 4594 | 363 | 1.924138 | 6.98462094 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 671 | 0 | NTclustered | gi|337238198|gb|HQ537698.1| | 10586 | g4493 | i0 | 100 | 80.7245179063361 | 363 | 0 | 100 | 0 | 1 | 363 | 1820 | 2182 | Human papillomavirus type 33 isolate Qv34060, complete genome | blastn | 29303 | 671 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 18671742 | 18671742 | PRJNA825466_P_NODE_16215_length_251_cov_1.308989_g16114_i0 | PRJNA825466 | 16215 | 251 | 1.308989 | 3.28556239 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 459 | 1.1499999999999996e-124 | NTclustered | gi|217316601|gb|FJ407199.1| | 10598 | g16114 | i0 | 99.602 | 99.99203187251 | 251 | 1 | 100 | 0 | 1 | 251 | 1600 | 1850 | Human papillomavirus type 58 isolate HPV58SC129 E1 protein gene, partial cds; E2 protein, E4 protein, E5 protein, L2 protein, L1 protein, E6 protein, and E7 protein genes, complete cds; and E1 protein gene, partial cds | blastn | 25098 | 459 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 18671749 | 18671749 | PRJNA825466_P_NODE_17755_length_250_cov_0.870056_g17654_i0 | PRJNA825466 | 17755 | 250 | 0.870056 | 2.17514 | Alphapapillomavirus 7 | 337042 | Viruses | Viruses | 435 | 1.92e-117 | NTclustered | gi|2330733543|gb|OP684039.1| | 333761 | g17654 | i0 | 98 | 99.936 | 250 | 5 | 100 | 0 | 1 | 250 | 254 | 503 | Human papillomavirus 18 isolate 18HNL12 late major capsid protein L1 (L1) gene, complete cds | blastn | 24984 | 435 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 7 | ||
| 19946942 | 19946942 | PRJNA825466_P_NODE_1176_length_634_cov_1.871658_g1080_i0 | PRJNA825466 | 1176 | 634 | 1.871658 | 11.86631172 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 915 | 0 | NTclustered | gi|1227043593|dbj|LC270031.1| | 10618 | g1080 | i0 | 93.659 | 102.104100946372 | 615 | 33 | 100 | 3 | 26 | 634 | 5284 | 5898 | Human papillomavirus type 52 DNA, complete genome, isolate: K1066 | blastn | 64734 | 915 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 19947004 | 19947004 | PRJNA825466_P_NODE_2736_length_438_cov_2.002740_g2635_i0 | PRJNA825466 | 2736 | 438 | 2.00274 | 8.7720012 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 804 | 0 | NTclustered | gi|337238189|gb|HQ537697.1| | 10586 | g2635 | i0 | 99.772 | 95.310502283105 | 438 | 1 | 100 | 0 | 1 | 438 | 1626 | 1189 | Human papillomavirus type 33 isolate AS099, complete genome | blastn | 41746 | 804 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 20354518 | 20354518 | PRJNA825466_P_NODE_456_length_970_cov_2.022297_g381_i0 | PRJNA825466 | 456 | 970 | 2.022297 | 19.6162809 | Alphapapillomavirus | 333750 | Viruses | Viruses | 1775 | 0 | NTclustered | gi|1162227033|gb|KY501965.1| | 10566 | g381 | i0 | 99.691 | 100 | 970 | 3 | 100 | 0 | 1 | 970 | 377 | 1346 | Human papillomavirus isolate HPV18 P1 replication protein E1 (E1) gene, partial cds | blastn | 97000 | 1786 | 0.993840985442329 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus | ||
| 21222466 | 21222466 | PRJNA825466_P_NODE_2057_length_492_cov_2.145585_g1957_i0 | PRJNA825466 | 2057 | 492 | 2.145585 | 10.5562782 | Alphapapillomavirus 6 | 337050 | Viruses | Viruses | 909 | 0 | NTclustered | gi|1898671329|emb|LR862081.1| | 37119 | g1957 | i0 | 100 | 86.0345528455285 | 492 | 0 | 100 | 0 | 1 | 492 | 5347 | 5838 | Human papillomavirus type 66 isolate LNS9786324_HPV66, complete genome | blastn | 42329 | 909 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 6 | ||
| 22497201 | 22497201 | PRJNA825466_P_NODE_3098_length_417_cov_1.244186_g2997_i0 | PRJNA825466 | 3098 | 417 | 1.244186 | 5.18825562 | Alphapapillomavirus 6 | 337050 | Viruses | Viruses | 760 | 0 | NTclustered | gi|1898669483|emb|LR861851.1| | 37119 | g2997 | i0 | 99.52 | 93.5707434052758 | 417 | 2 | 100 | 0 | 1 | 417 | 955 | 539 | Human papillomavirus type 66 isolate LNS2720744_HPV66, complete genome | blastn | 39019 | 760 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 6 | ||
| 22497215 | 22497215 | PRJNA825466_P_NODE_7258_length_315_cov_3.181818_g7157_i0 | PRJNA825466 | 7258 | 315 | 3.181818 | 10.0227267 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 582 | 8.459999999999998e-162 | NTclustered | gi|1227043593|dbj|LC270031.1| | 10618 | g7157 | i0 | 100 | 100 | 315 | 0 | 100 | 0 | 1 | 315 | 5041 | 4727 | Human papillomavirus type 52 DNA, complete genome, isolate: K1066 | blastn | 31500 | 582 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 25046785 | 25046785 | PRJNA825466_P_NODE_5980_length_334_cov_1.724138_g5879_i0 | PRJNA825466 | 5980 | 334 | 1.724138 | 5.75862092 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 612 | 1.15e-170 | NTclustered | gi|1227044160|dbj|LC270094.1| | 10598 | g5879 | i0 | 99.701 | 99.997005988024 | 334 | 1 | 100 | 0 | 1 | 334 | 7421 | 7088 | Human papillomavirus type 58 DNA, complete genome, isolate: K1218 | blastn | 33399 | 612 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 25046792 | 25046792 | PRJNA825466_P_NODE_7540_length_312_cov_1.251046_g7439_i0 | PRJNA825466 | 7540 | 312 | 1.251046 | 3.90326352 | Alphapapillomavirus 9 | 337041 | Viruses | Viruses | 566 | 8.429999999999998e-157 | NTclustered | gi|1227043593|dbj|LC270031.1| | 10618 | g7439 | i0 | 99.359 | 99.9935897435897 | 312 | 2 | 100 | 0 | 1 | 312 | 795 | 1106 | Human papillomavirus type 52 DNA, complete genome, isolate: K1066 | blastn | 31198 | 566 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Alphapapillomavirus | Alphapapillomavirus 9 | ||
| 25454761 | 25454761 | PRJNA825466_P_NODE_3340_length_407_cov_2.041916_g3239_i0 | PRJNA825466 | 3340 | 407 | 2.041916 | 8.31059812 | Alphapapillomavirus | 333750 | Viruses | Viruses | 752 | 0 | NTclustered | gi|2416400470|gb|OP721190.1| | 10566 | g3239 | i0 | 100 | 100 | 407 | 0 | 100 | 0 | 1 | 407 | 538 | 944 | MAG: Human papillomavirus isolate LSIL25_seq1 genomic sequence | blastn | 40700 | 752 | 1 | Viruses | Human papillomavirus types | Shotokuvirae | Cossaviricota | Papovaviricetes | Zurhausenvirales | Papillomaviridae | Human papillomavirus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;