RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA825466" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA825466 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
820398 820398 PRJNA825466_P_NODE_12141_length_274_cov_1.532338_g12040_i0 PRJNA825466 12141 274 1.532338 4.19860612 Schizophyllum commune 5334 Fungi Fungi 424 4.63e-114   NTclustered gi|302690605|ref|XM_003034936.1| 578458 g12040 i0 94.526 10.8394160583942 274 15 100 0 1 274 1058 785 Schizophyllum commune H4-8 T-complex protein 1 (SCHCODRAFT_081205), partial mRNA blastn 2970 424 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Schizophyllaceae Schizophyllum Schizophyllum commune
2095953 2095953 PRJNA825466_P_NODE_20162_length_248_cov_0.880000_g20061_i0 PRJNA825466 20162 248 0.88 2.1824 Melampsora laricis-populina 203908 Fungi Fungi 211 3.5e-50   NTclustered gi|599397464|ref|XM_007411659.1| 747676 g20061 i0 82.114 0.991935483870968 246 44 99 0 3 248 508 263 Melampsora larici-populina 98AG31 uncharacterized protein (MELLADRAFT_72264), mRNA blastn 246 211 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Melampsoraceae Melampsora Melampsora laricis-populina
8473331 8473331 PRJNA825466_P_NODE_20127_length_248_cov_0.880000_g20026_i0 PRJNA825466 20127 248 0.88 2.1824 Malassezia globosa 76773 Fungi Fungi 459 1.13e-124   NTclustered gi|164658753|ref|XM_001730450.1| 425265 g20026 i0 100 1 248 0 100 0 1 248 325 572 Malassezia globosa CBS 7966 uncharacterized protein (MGL_2298), partial mRNA blastn 248 459 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
22497134 22497134 PRJNA825466_P_NODE_10498_length_284_cov_11.146919_g10397_i0 PRJNA825466 10498 284 11.146919 31.65724996 Pseudomicrostroma glucosiphilum 1684307 Fungi Fungi 193 1.48e-44   NTclustered gi|1418633411|ref|XM_025492511.1| 1684307 g10397 i0 79.371 91.612676056338 286 49 99 7 2 282 292 12 Pseudomicrostroma glucosiphilum putative translation elongation factor eEF-1 alpha chain (BCV69DRAFT_282886), mRNA blastn 26018 193 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Microstromatales   Pseudomicrostroma Pseudomicrostroma glucosiphilum
22497176 22497176 PRJNA825466_P_NODE_22238_length_246_cov_0.890173_g22137_i0 PRJNA825466 22238 246 0.890173 2.18982558 Melampsora laricis-populina 203908 Fungi Fungi 180 9.77e-41   NTclustered gi|599397464|ref|XM_007411659.1| 747676 g22137 i0 84.264 0.800813008130081 197 18 80 10 7 202 220 36 Melampsora larici-populina 98AG31 uncharacterized protein (MELLADRAFT_72264), mRNA blastn 197 180 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Melampsoraceae Melampsora Melampsora laricis-populina
22497187 22497187 PRJNA825466_P_NODE_27278_length_242_cov_0.911243_g27177_i0 PRJNA825466 27278 242 0.911243 2.20520806 Malassezia globosa 76773 Fungi Fungi 364 2.4699999999999992e-96   NTclustered gi|164658811|ref|XM_001730479.1| 425265 g27177 i0 93.802 1 242 15 100 0 1 242 1541 1300 Malassezia globosa CBS 7966 uncharacterized protein (MGL_2327), partial mRNA blastn 242 364 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;