contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA816527" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 819415 | 819415 | PRJNA816527_P_NODE_17381_length_250_cov_0.870056_g17331_i0 | PRJNA816527 | 17381 | 250 | 0.870056 | 2.17514 | Leifsonia xyli | 1575 | Bacteria | Bacteria | 268 | 2.07e-67 | NTclustered | gi|1029984024|gb|CP014761.1| | 1575 | g17331 | i0 | 86.111 | 50.816 | 252 | 31 | 100 | 4 | 1 | 250 | 3534480 | 3534231 | Leifsonia xyli strain SE134 chromosome, complete genome | blastn | 12704 | 268 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Leifsonia | Leifsonia xyli | ||
| 2094958 | 2094958 | PRJNA816527_P_NODE_16502_length_253_cov_2.233333_g16452_i0 | PRJNA816527 | 16502 | 253 | 2.233333 | 5.65033249 | Actinomyces radicidentis | 111015 | Bacteria | Bacteria | 392 | 1.1899999999999997e-104 | NTclustered | gi|987450852|gb|CP014228.1| | 111015 | g16452 | i0 | 94.531 | 3.68379446640316 | 256 | 11 | 100 | 1 | 1 | 253 | 1232330 | 1232585 | Actinomyces radicidentis strain CCUG 36733 chromosome, complete genome | blastn | 932 | 392 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces radicidentis | ||
| 3779829 | 3779829 | PRJNA816527_P_NODE_14503_length_275_cov_2.089109_g14453_i0 | PRJNA816527 | 14503 | 275 | 2.089109 | 5.74504975 | Rhodococcus | 1827 | Bacteria | Bacteria | 503 | 5.809999999999998e-138 | NTclustered | gi|2660106423|gb|CP138905.1| | 1831 | g14453 | i0 | 99.636 | 56.2909090909091 | 275 | 1 | 100 | 0 | 1 | 275 | 1752283 | 1752557 | MAG: Rhodococcus sp. (in: high G+C Gram-positive bacteria) isolate 1088c chromosome | blastn | 15480 | 508 | 0.990157480314961 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcus | Rhodococcus sp. (in: high G+C Gram-positive bacteria) | ||
| 3779868 | 3779868 | PRJNA816527_P_NODE_20383_length_241_cov_1.559524_g20333_i0 | PRJNA816527 | 20383 | 241 | 1.559524 | 3.75845284 | Corynebacterium | 1716 | Bacteria | Bacteria | 440 | 3.959999999999999e-119 | NTclustered | gi|171191170|gb|EU373370.1| | 1717 | g20333 | i0 | 99.585 | 190.03734439834 | 241 | 1 | 100 | 0 | 1 | 241 | 1320 | 1080 | Corynebacterium diphtheriae strain TPL03 16S ribosomal RNA gene, partial sequence | blastn | 45799 | 440 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium diphtheriae | ||
| 7197565 | 7197565 | PRJNA816527_P_NODE_16606_length_252_cov_1.446927_g16556_i0 | PRJNA816527 | 16606 | 252 | 1.446927 | 3.64625604 | Leifsonia sp. WHRI 6310E | 3162562 | Bacteria | Bacteria | 294 | 3.44e-75 | NTclustered | gi|2801868331|gb|CP168169.1| | 3162562 | g16556 | i0 | 87.698 | 99.7619047619048 | 252 | 31 | 100 | 0 | 1 | 252 | 2437065 | 2436814 | Leifsonia sp. WHRI 6310E chromosome, complete genome | blastn | 25140 | 294 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Leifsonia | Leifsonia sp. WHRI 6310E | ||
| 11023112 | 11023112 | PRJNA816527_P_NODE_14129_length_279_cov_2.135922_g14079_i0 | PRJNA816527 | 14129 | 279 | 2.135922 | 5.95922238 | Leifsonia shinshuensis | 150026 | Bacteria | Bacteria | 285 | 2.3299999999999997e-72 | NTclustered | gi|1890941476|gb|CP043641.1| | 150026 | g14079 | i0 | 85.816 | 9.2831541218638 | 282 | 25 | 100 | 5 | 1 | 279 | 3508873 | 3509142 | Leifsonia shinshuensis strain INR9 chromosome, complete genome | blastn | 2590 | 285 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Leifsonia | Leifsonia shinshuensis | ||
| 12298689 | 12298689 | PRJNA816527_P_NODE_19990_length_242_cov_1.828402_g19940_i0 | PRJNA816527 | 19990 | 242 | 1.828402 | 4.42473284 | Microbacterium maritypicum | 33918 | Bacteria | Bacteria | 226 | 1.2099999999999997e-54 | NTclustered | gi|2274432258|gb|CP101471.1| | 33918 | g19940 | i0 | 95.775 | 16.595041322314 | 142 | 3 | 58 | 2 | 102 | 241 | 1598023 | 1598163 | Microbacterium maritypicum strain DND4 chromosome, complete genome | blastn | 4016 | 226 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium maritypicum | ||
| 15256038 | 15256038 | PRJNA816527_P_NODE_7392_length_380_cov_2.524430_g7342_i0 | PRJNA816527 | 7392 | 380 | 2.52443 | 9.592834 | Corynebacterium | 1716 | Bacteria | Bacteria | 697 | 0 | NTclustered | gi|2894611912|gb|PV018956.1| | 1720 | g7342 | i0 | 99.737 | 100 | 380 | 1 | 100 | 0 | 1 | 380 | 705 | 326 | Corynebacterium sp. strain LMT-16 16S ribosomal RNA gene, partial sequence | blastn | 38000 | 697 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. | ||
| 17397833 | 17397833 | PRJNA816527_P_NODE_18954_length_245_cov_1.674419_g18904_i0 | PRJNA816527 | 18954 | 245 | 1.674419 | 4.10232655 | Citricoccus nitrophenolicus | 863575 | Bacteria | Bacteria | 315 | 2.55e-81 | NTclustered | gi|2895617228|gb|CP063070.1| | 863575 | g18904 | i0 | 89.796 | 1 | 245 | 25 | 100 | 0 | 1 | 245 | 3109707 | 3109463 | Citricoccus nitrophenolicus strain B1 chromosome, complete genome | blastn | 245 | 315 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Citricoccus | Citricoccus nitrophenolicus | ||
| 17397887 | 17397887 | PRJNA816527_P_NODE_20794_length_228_cov_2.522581_g20744_i0 | PRJNA816527 | 20794 | 228 | 2.522581 | 5.75148468 | Micrococcus yunnanensis | 566027 | Bacteria | Bacteria | 307 | 3.9300000000000005e-79 | NTclustered | gi|2506638323|gb|CP125290.1| | 566027 | g20744 | i0 | 91.15 | 49.7280701754386 | 226 | 20 | 99 | 0 | 1 | 226 | 800883 | 800658 | Micrococcus yunnanensis strain TJPT4 chromosome, complete genome | blastn | 11338 | 307 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus yunnanensis | ||
| 19946065 | 19946065 | PRJNA816527_P_NODE_19636_length_243_cov_2.652941_g19586_i0 | PRJNA816527 | 19636 | 243 | 2.652941 | 6.44664663 | Leifsonia shinshuensis | 150026 | Bacteria | Bacteria | 272 | 1.5399999999999998e-68 | NTclustered | gi|1890941476|gb|CP043641.1| | 150026 | g19586 | i0 | 86.831 | 3.5843621399177 | 243 | 32 | 100 | 0 | 1 | 243 | 1328716 | 1328474 | Leifsonia shinshuensis strain INR9 chromosome, complete genome | blastn | 871 | 272 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Leifsonia | Leifsonia shinshuensis | ||
| 21221436 | 21221436 | PRJNA816527_P_NODE_15797_length_261_cov_2.015957_g15747_i0 | PRJNA816527 | 15797 | 261 | 2.0159570000000002 | 5.26164777 | Microbacterium proteolyticum | 1572644 | Bacteria | Bacteria | 483 | 7.12e-132 | NTclustered | gi|2482566189|gb|CP121274.1| | 1572644 | g15747 | i0 | 100 | 2 | 261 | 0 | 100 | 0 | 1 | 261 | 185126 | 184866 | Microbacterium proteolyticum strain ustc chromosome, complete genome | blastn | 522 | 483 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium proteolyticum | ||
| 22496161 | 22496161 | PRJNA816527_P_NODE_16598_length_252_cov_1.720670_g16548_i0 | PRJNA816527 | 16598 | 252 | 1.72067 | 4.3360884 | Nakamurella multipartita | 53461 | Bacteria | Bacteria | 239 | 1.6300000000000002e-58 | NTclustered | gi|258553496|gb|CP001737.1| | 479431 | g16548 | i0 | 83.73 | 100.615079365079 | 252 | 41 | 100 | 0 | 1 | 252 | 4403800 | 4404051 | Nakamurella multipartita DSM 44233 chromosome, complete genome | blastn | 25355 | 239 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Nakamurellales | Nakamurellaceae | Nakamurella | Nakamurella multipartita | ||
| 25045621 | 25045621 | PRJNA816527_P_NODE_13060_length_290_cov_1.419355_g13010_i0 | PRJNA816527 | 13060 | 290 | 1.419355 | 4.1161295 | Leifsonia sp. ZF2019 | 2781978 | Bacteria | Bacteria | 320 | 6.67e-83 | NTclustered | gi|2093112753|gb|CP065037.1| | 2781978 | g13010 | i0 | 89.412 | 35.2034482758621 | 255 | 26 | 88 | 1 | 37 | 290 | 2185897 | 2185643 | Leifsonia sp. ZF2019 chromosome, complete genome | blastn | 10209 | 320 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Leifsonia | Leifsonia sp. ZF2019 | ||
| 25454549 | 25454549 | PRJNA816527_P_NODE_14840_length_272_cov_1.266332_g14790_i0 | PRJNA816527 | 14840 | 272 | 1.266332 | 3.44442304 | Leifsonia | 110932 | Bacteria | Bacteria | 289 | 1.75e-73 | NTclustered | gi|1890941476|gb|CP043641.1| | 150026 | g14790 | i0 | 92.195 | 72.3125 | 205 | 15 | 75 | 1 | 1 | 204 | 1010396 | 1010600 | Leifsonia shinshuensis strain INR9 chromosome, complete genome | blastn | 19669 | 289 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Leifsonia | Leifsonia shinshuensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;