contig_metadata
17 rows where analysis = "blastn", bioproject = "PRJNA816047" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25634166 | 25634166 | PRJNA816047b_S_NODE_35113_length_285_cov_2.424528_g32801_i0 | PRJNA816047 | 35113 | 285 | 2.424528 | 6.9099048 | Roseiflexus | 120961 | Bacteria | Bacteria | 159 | 1.51e-34 | NTclustered | gi|470481958|ref|NR_076505.1| | 357808 | g32801 | i0 | 83.24 | 9.50526315789474 | 179 | 25 | 62 | 5 | 17 | 194 | 52 | 226 | Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence | blastn | 2709 | 159 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Roseiflexaceae | Roseiflexus | Roseiflexus sp. RS-1 | ||
| 25734878 | 25734878 | PRJNA816047b_S_NODE_33546_length_291_cov_0.876147_g31234_i0 | PRJNA816047 | 33546 | 291 | 0.876147 | 2.54958777 | Tepidiformaceae bacterium | 3022862 | Bacteria | Bacteria | 69.4 | 2.68e-7 | NTclustered | gi|2893358447|emb|OZ220739.1| | 3022862 | g31234 | i0 | 93.478 | 0.15807560137457 | 46 | 3 | 16 | 0 | 1 | 46 | 855452 | 855407 | MAG: Tepidiformaceae bacterium isolate ddb3cf28-bb63-44a4-8fd1-08202229d10a genome assembly, chromosome: 1 | blastn | 46 | 69.4 | 1 | Bacteria | Bacillati | Chloroflexota | Tepidiformia | Tepidiformales | Tepidiformaceae | Tepidiformaceae bacterium | |||
| 25738114 | 25738114 | PRJNA816047d_S_NODE_143410_length_219_cov_2911.771084_g141575_i0 | PRJNA816047 | 143410 | 219 | 2911.771084 | 6376.77867396 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 76.8 | 1.15e-9 | NTclustered | gi|2166239447|dbj|LC662861.1| | 2026734 | g141575 | i0 | 95.745 | 193.420091324201 | 47 | 2 | 21 | 0 | 156 | 202 | 5116 | 5162 | Dehalococcoidia bacterium ARSSAG-00000218 DNA, putative prophage region, clone: 00000218_pp1 | blastn | 42359 | 76.8 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 25742316 | 25742316 | PRJNA816047d_S_NODE_77970_length_264_cov_1.033175_g76135_i0 | PRJNA816047 | 77970 | 264 | 1.033175 | 2.727582 | Thermobaculum terrenum ATCC BAA-798 | 525904 | Bacteria | Bacteria | 431 | 2.65e-116 | NTclustered | gi|269788783|gb|CP001825.1| | 525904 | g76135 | i0 | 96.887 | 0.973484848484849 | 257 | 8 | 97 | 0 | 1 | 257 | 888665 | 888409 | Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete sequence | blastn | 257 | 431 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Candidatus Thermobaculales | Candidatus Thermobaculaceae | Thermobaculum | Thermobaculum terrenum | ||
| 25876061 | 25876061 | PRJNA816047d_S_NODE_40331_length_340_cov_3.526132_g38496_i0 | PRJNA816047 | 40331 | 340 | 3.526132 | 11.9888488 | Phototrophicus methaneseepsis | 2710758 | Bacteria | Bacteria | 206 | 2.33e-48 | NTclustered | gi|1932369605|gb|CP062983.1| | 2710758 | g38496 | i0 | 87.64 | 0.523529411764706 | 178 | 21 | 52 | 1 | 20 | 196 | 4345217 | 4345394 | Phototrophicus methaneseepsis strain ZRK33 chromosome, complete genome | blastn | 178 | 206 | 1 | Bacteria | Bacillati | Chloroflexota | Candidatus Thermofontia | Phototrophicales | Phototrophicaceae | Phototrophicus | Phototrophicus methaneseepsis | ||
| 26009794 | 26009794 | PRJNA816047d_S_NODE_128532_length_232_cov_2735.988827_g126697_i0 | PRJNA816047 | 128532 | 232 | 2735.988827 | 6347.49407864 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 78.7 | 3.42e-10 | NTclustered | gi|2166239447|dbj|LC662861.1| | 2026734 | g126697 | i0 | 100 | 183.375 | 42 | 0 | 18 | 0 | 18 | 59 | 5162 | 5121 | Dehalococcoidia bacterium ARSSAG-00000218 DNA, putative prophage region, clone: 00000218_pp1 | blastn | 42543 | 78.7 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 26009970 | 26009970 | PRJNA816047d_S_NODE_133188_length_228_cov_2.371429_g131353_i0 | PRJNA816047 | 133188 | 228 | 2.371429 | 5.40685812 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 52.8 | 0.02 | NTclustered | gi|2621704692|emb|OY762063.1| | 2026734 | g131353 | i0 | 100 | 0.12280701754386 | 28 | 0 | 12 | 0 | 118 | 145 | 2263657 | 2263684 | MAG: Dehalococcoidia bacterium isolate 5405c63e-44e1-4988-9b68-fe709a885d54 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 26011874 | 26011874 | PRJNA816047d_S_NODE_31788_length_378_cov_7406.273846_g29954_i0 | PRJNA816047 | 31788 | 378 | 7406.273846 | 27995.71513788 | Thermobaculum terrenum ATCC BAA-798 | 525904 | Bacteria | Bacteria | 564 | 3.74e-156 | NTclustered | gi|269788783|gb|CP001825.1| | 525904 | g29954 | i0 | 99.357 | 2.32804232804233 | 311 | 2 | 82 | 0 | 1 | 311 | 696183 | 696493 | Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete sequence | blastn | 880 | 564 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Candidatus Thermobaculales | Candidatus Thermobaculaceae | Thermobaculum | Thermobaculum terrenum | ||
| 26014710 | 26014710 | PRJNA816047d_S_NODE_86500_length_258_cov_2.282927_g84665_i0 | PRJNA816047 | 86500 | 258 | 2.282927 | 5.88995166 | Thermobaculum terrenum ATCC BAA-798 | 525904 | Bacteria | Bacteria | 451 | 1.98e-122 | NTclustered | gi|269790643|gb|CP001826.1| | 525904 | g84665 | i0 | 98.438 | 0.992248062015504 | 256 | 4 | 99 | 0 | 1 | 256 | 612189 | 612444 | Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete sequence | blastn | 256 | 451 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Candidatus Thermobaculales | Candidatus Thermobaculaceae | Thermobaculum | Thermobaculum terrenum | ||
| 26148286 | 26148286 | PRJNA816047d_S_NODE_35893_length_358_cov_1.422951_g34058_i0 | PRJNA816047 | 35893 | 358 | 1.422951 | 5.09416458 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 209 | 1.9e-49 | NTclustered | gi|2874253860|emb|OY969916.1| | 1672391 | g34058 | i0 | 78.778 | 0.868715083798883 | 311 | 66 | 87 | 0 | 23 | 333 | 4091801 | 4091491 | MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 | blastn | 311 | 209 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 26150560 | 26150560 | PRJNA816047d_S_NODE_77437_length_264_cov_4.364929_g75602_i0 | PRJNA816047 | 77437 | 264 | 4.364929 | 11.52341256 | Thermobaculum terrenum ATCC BAA-798 | 525904 | Bacteria | Bacteria | 344 | 3.55e-90 | NTclustered | gi|269788783|gb|CP001825.1| | 525904 | g75602 | i0 | 93.86 | 0.863636363636364 | 228 | 14 | 86 | 0 | 22 | 249 | 1501955 | 1502182 | Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete sequence | blastn | 228 | 344 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Candidatus Thermobaculales | Candidatus Thermobaculaceae | Thermobaculum | Thermobaculum terrenum | ||
| 26284894 | 26284894 | PRJNA816047d_S_NODE_46790_length_320_cov_38889.782772_g44955_i0 | PRJNA816047 | 46790 | 320 | 38889.782772 | 124447.3048704 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 76.8 | 1.78e-9 | NTclustered | gi|2166239447|dbj|LC662861.1| | 2026734 | g44955 | i0 | 100 | 119.325 | 41 | 0 | 13 | 0 | 256 | 296 | 5119 | 5159 | Dehalococcoidia bacterium ARSSAG-00000218 DNA, putative prophage region, clone: 00000218_pp1 | blastn | 38184 | 76.8 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 26418972 | 26418972 | PRJNA816047d_S_NODE_196063_length_200_cov_3312.557823_g194228_i0 | PRJNA816047 | 196063 | 200 | 3312.557823 | 6625.115646 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 80.5 | 7.97e-11 | NTclustered | gi|2166239447|dbj|LC662861.1| | 2026734 | g194228 | i0 | 94.34 | 210.99 | 53 | 1 | 26 | 2 | 18 | 68 | 5162 | 5110 | Dehalococcoidia bacterium ARSSAG-00000218 DNA, putative prophage region, clone: 00000218_pp1 | blastn | 42198 | 80.5 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 26552160 | 26552160 | PRJNA816047b_S_NODE_47040_length_252_cov_0.860335_g44728_i0 | PRJNA816047 | 47040 | 252 | 0.860335 | 2.1680442 | Anaerolinea thermophila UNI-1 | 926569 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|319993263|dbj|AP012029.1| | 926569 | g44728 | i0 | 94.444 | 0.142857142857143 | 36 | 2 | 14 | 0 | 129 | 164 | 1951544 | 1951509 | Anaerolinea thermophila UNI-1 DNA, complete genome | blastn | 36 | 56.5 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineaceae | Anaerolinea | Anaerolinea thermophila | ||
| 26556157 | 26556157 | PRJNA816047d_S_NODE_35224_length_361_cov_1.194805_g33389_i0 | PRJNA816047 | 35224 | 361 | 1.194805 | 4.31324605 | Thermobaculum terrenum ATCC BAA-798 | 525904 | Bacteria | Bacteria | 580 | 3.529999999999999e-161 | NTclustered | gi|269788783|gb|CP001825.1| | 525904 | g33389 | i0 | 99.071 | 0.894736842105263 | 323 | 3 | 89 | 0 | 39 | 361 | 695682 | 696004 | Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete sequence | blastn | 323 | 580 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Candidatus Thermobaculales | Candidatus Thermobaculaceae | Thermobaculum | Thermobaculum terrenum | ||
| 26556951 | 26556951 | PRJNA816047d_S_NODE_49032_length_315_cov_0.919847_g47197_i0 | PRJNA816047 | 49032 | 315 | 0.919847 | 2.89751805 | Thermobaculum terrenum ATCC BAA-798 | 525904 | Bacteria | Bacteria | 466 | 8.89e-127 | NTclustered | gi|269788783|gb|CP001825.1| | 525904 | g47197 | i0 | 94.408 | 0.965079365079365 | 304 | 16 | 97 | 1 | 12 | 315 | 1822265 | 1821963 | Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete sequence | blastn | 304 | 466 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Candidatus Thermobaculales | Candidatus Thermobaculaceae | Thermobaculum | Thermobaculum terrenum | ||
| 26557515 | 26557515 | PRJNA816047d_S_NODE_58816_length_293_cov_2.254167_g56981_i0 | PRJNA816047 | 58816 | 293 | 2.254167 | 6.60470931 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 257 | 5.36e-64 | NTclustered | gi|2874253788|emb|OY969772.1| | 1672391 | g56981 | i0 | 84.674 | 38.2525597269625 | 261 | 37 | 88 | 3 | 1 | 259 | 861286 | 861545 | MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.2.42 genome assembly, chromosome: 1 | blastn | 11208 | 257 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;