RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA816047" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 8 ✖

bioproject 1

  • PRJNA816047 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25606698 25606698 PRJNA816047d_S_NODE_96641_length_252_cov_1.738693_g94806_i0 PRJNA816047 96641 252 1.738693 4.38150636 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 117 7.99e-22   NTclustered gi|686642880|ref|XM_009315611.1| 71804 g94806 i0 82.963 2.67857142857143 135 17 52 6 117 248 420 289 Trypanosoma grayi 60S ribosomal subunit protein L31 partial mRNA blastn 675 117 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
25731237 25731237 PRJNA816047a_S_NODE_63474_length_266_cov_1.943005_g60814_i0 PRJNA816047 63474 266 1.943005 5.1683933 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 396 9.759999999999997e-106   NTclustered gi|290969751|ref|XM_002667899.1| 5762 g60814 i0 96.667 28.6691729323308 240 5 89 3 1 238 191 429 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55041), partial mRNA blastn 7626 396 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
25737131 25737131 PRJNA816047d_S_NODE_10634_length_758_cov_5.266667_g9196_i0 PRJNA816047 10634 758 5.266667 39.92133586 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 427 1.08e-114   NTclustered gi|227908931|gb|FJ807263.2| 56452 g9196 i0 85.106 1.53166226912929 423 57 55 6 9 428 643 1062 Petalomonas cantuscygni strain AMOP1 elongation factor-like gene, partial cds blastn 1161 427 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
26315271 26315271 PRJNA816047d_S_NODE_114222_length_244_cov_0.916230_g112387_i0 PRJNA816047 114222 244 0.91623 2.2356012 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 158 4.53e-34   NTclustered gi|2414483|emb|Y00055.1| 5656 g112387 i0 82.011 99.344262295082 189 30 77 3 28 215 8071 8256 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 24240 158 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
26417143 26417143 PRJNA816047d_S_NODE_104351_length_248_cov_1.323077_g102516_i0 PRJNA816047 104351 248 1.323077 3.28123096 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 414 2.48e-111   NTclustered gi|290969751|ref|XM_002667899.1| 5762 g102516 i0 96.774 16.3951612903226 248 8 100 0 1 248 42 289 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55041), partial mRNA blastn 4066 414 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26418003 26418003 PRJNA816047d_S_NODE_13383_length_640_cov_4.459966_g11786_i0 PRJNA816047 13383 640 4.459966 28.5437824 Neobodo saliens 351712 Euglenozoa other_Eukaryota 246 2.72e-60   NTclustered gi|25986824|gb|AY122626.1| 351712 g11786 i0 76.639 41.840625 488 88 74 19 1 475 1411 1885 Bodo saliens strain ATCC 50358 clone 5 heat shock protein 90 (HSP-90) gene, partial cds blastn 26778 246 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo saliens
26554017 26554017 PRJNA816047d_S_NODE_13120_length_649_cov_2.166107_g11536_i0 PRJNA816047 13120 649 2.166107 14.05803443 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 241 1.28e-58   NTclustered gi|1673133101|ref|XM_029369425.1| 83891 g11536 i0 76.104 20.3913713405239 498 98 74 16 4 486 823 1314 Trypanosoma conorhini adenosylhomocysteinase (Tco025E_02500), partial mRNA blastn 13234 241 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
26558904 26558904 PRJNA816047d_S_NODE_91312_length_255_cov_3.217822_g89477_i0 PRJNA816047 91312 255 3.217822 8.2054461 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 65.8 2.98e-6   NTclustered gi|91983198|gb|DQ450539.1| 71804 g89477 i0 95.238 0.796078431372549 42 1 16 1 1 42 2117 2157 Trypanosoma grayi beta tubulin gene, partial cds; alpha tubulin gene, complete cds; and beta tubulin gene, partial cds blastn 203 65.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;