RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA816047" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA816047 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26011876 26011876 PRJNA816047d_S_NODE_31844_length_378_cov_3.636923_g30010_i0 PRJNA816047 31844 378 3.636923 13.74756894 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 333 1.15e-86   NTclustered gi|2893356064|emb|OZ220487.1| 3036252 g30010 i0 84.412 1.81746031746032 340 51 89 1 41 378 353192 353531 MAG: uncultured Candidatus Binatia bacterium isolate d2d8104a-f810-4fb4-bb0c-dc82b69497ba genome assembly, chromosome: 1 blastn 687 333 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium
26549145 26549145 PRJNA816047a_S_NODE_8552_length_694_cov_5.156200_g6067_i0 PRJNA816047 8552 694 5.1562 35.784028 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 106 5.24e-18   NTclustered gi|2108435138|gb|CP070627.1| 2052149 g6067 i0 88.636 14.8703170028818 88 8 12 2 301 386 8929509 8929422 MAG: Candidatus Aminicenantes bacterium isolate bin99 chromosome blastn 10320 106 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
26554359 26554359 PRJNA816047d_S_NODE_147368_length_216_cov_34506.061350_g145533_i0 PRJNA816047 147368 216 34506.06135 74533.092516 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 52.8 0.019   NTclustered gi|1950824677|gb|CP066698.1| 2053554 g145533 i0 100 0.12962962962963 28 0 13 0 104 131 649343 649316 MAG: Candidatus Falkowbacteria bacterium isolate NC_groundwater_1683_Pr3_B-0.1um_40_26 chromosome blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium
26558861 26558861 PRJNA816047d_S_NODE_89880_length_256_cov_1.586207_g88045_i0 PRJNA816047 89880 256 1.586207 4.06068992 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 89.8 1.77e-13   NTclustered gi|2891481979|emb|OZ219754.1| 3036252 g88045 i0 82.353 2.28125 102 18 42 0 21 122 499063 498962 MAG: uncultured Candidatus Binatia bacterium isolate 58a26a4a-5c73-4e1d-804e-87f8126ae6b7 genome assembly, chromosome: 1 blastn 584 89.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;