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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA815356" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA815356 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2503425 2503425 PRJNA815356_P_NODE_882_length_668_cov_10.115966_g725_i0 PRJNA815356 882 668 10.115966 67.57465288 Naegleria 5761 Heterolobosea other_Eukaryota 1206 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g725 i0 99.251 28.6017964071856 668 5 100 0 1 668 3800 4467 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 19106 1218 0.990147783251232 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5922300 5922300 PRJNA815356_P_NODE_2905_length_397_cov_1.759259_g2742_i0 PRJNA815356 2905 397 1.759259 6.98425823 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 652 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g2742 i0 97.389 28.735516372796 383 10 96 0 1 383 49816 49434 Naegleria gruberi mitochondrion, complete genome blastn 11408 652 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6331970 6331970 PRJNA815356_P_NODE_10485_length_243_cov_0.917647_g10322_i0 PRJNA815356 10485 243 0.917647 2.22988221 Naegleria 5761 Heterolobosea other_Eukaryota 449 6.65e-122   NTclustered gi|2618963742|gb|OR769034.1| 5762 g10322 i0 100 53 243 0 100 0 1 243 3640 3398 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 12879 449 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8880929 8880929 PRJNA815356_P_NODE_5207_length_313_cov_7.370833_g5044_i0 PRJNA815356 5207 313 7.370833 23.07070729 Naegleria 5761 Heterolobosea other_Eukaryota 573 5.049999999999998e-159   NTclustered gi|2618963742|gb|OR769034.1| 5762 g5044 i0 99.681 10.1341853035144 313 1 100 0 1 313 5792 5480 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 3172 573 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11022955 11022955 PRJNA815356_P_NODE_889_length_666_cov_3.278246_g731_i0 PRJNA815356 889 666 3.278246 21.83311836 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 1090 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g731 i0 96.246 10.6726726726727 666 24 100 1 1 666 805 141 Naegleria gruberi mitochondrion, complete genome blastn 7108 1090 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14847247 14847247 PRJNA815356_P_NODE_7592_length_268_cov_2.738462_g7429_i0 PRJNA815356 7592 268 2.738462 7.33907816 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 481 2.64e-131   NTclustered gi|38606344|gb|AY376152.1| 51634 g7429 i0 98.889 22.2649253731343 270 1 100 1 1 268 97 366 Naegleria australiensis isolate 7857 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 5967 481 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
17397533 17397533 PRJNA815356_P_NODE_8534_length_256_cov_1.683060_g8371_i0 PRJNA815356 8534 256 1.68306 4.3086336 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 394 3.36e-105   NTclustered gi|11466174|ref|NC_002573.1| 5762 g8371 i0 95.547 9.10546875 247 10 96 1 10 256 47023 46778 Naegleria gruberi mitochondrion, complete genome blastn 2331 394 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18670444 18670444 PRJNA815356_P_NODE_10935_length_237_cov_3.908537_g10772_i0 PRJNA815356 10935 237 3.908537 9.26323269 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 394 3.069999999999999e-105   NTclustered gi|11466174|ref|NC_002573.1| 5762 g10772 i0 96.624 154.654008438819 237 8 100 0 1 237 756 992 Naegleria gruberi mitochondrion, complete genome blastn 36653 394 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19945646 19945646 PRJNA815356_P_NODE_10996_length_236_cov_4.000000_g10833_i0 PRJNA815356 10996 236 4 9.44 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 418 1.8099999999999994e-112   NTclustered gi|11466174|ref|NC_002573.1| 5762 g10833 i0 98.723 70.6440677966102 235 3 99 0 1 235 978 1212 Naegleria gruberi mitochondrion, complete genome blastn 16672 418 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22495851 22495851 PRJNA815356_P_NODE_1198_length_584_cov_3.129159_g1038_i0 PRJNA815356 1198 584 3.129159 18.27428856 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 1079 0   NTclustered gi|32479131|gb|AY321362.1| 51634 g1038 i0 100 96.7191780821918 584 0 100 0 1 584 1200 617 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 56484 1079 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
22495855 22495855 PRJNA815356_P_NODE_1838_length_481_cov_3.723039_g1676_i0 PRJNA815356 1838 481 3.723039 17.90781759 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 784 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g1676 i0 96.058 35.004158004158 482 17 100 2 1 481 1931 1451 Naegleria gruberi mitochondrion, complete genome blastn 16837 784 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22495876 22495876 PRJNA815356_P_NODE_378_length_1019_cov_21.187104_g246_i0 PRJNA815356 378 1019 21.187104 215.89658976 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 1866 0   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g246 i0 99.706 37.0284592737978 1019 3 100 0 1 1019 2338 3356 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 37732 1866 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
25045494 25045494 PRJNA815356_P_NODE_9360_length_250_cov_0.881356_g9197_i0 PRJNA815356 9360 250 0.881356 2.20339 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 401 1.9499999999999994e-107   NTclustered gi|290974400|ref|XM_002669888.1| 5762 g9197 i0 95.6 1.92 250 11 100 0 1 250 1604 1355 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82010), partial mRNA blastn 480 401 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;