RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA814235" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA814235 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
817029 817029 PRJNA814235_P_NODE_194521_length_151_cov_2.464912_g193126_i0 PRJNA814235 194521 151 2.464912 3.72201712 Rubrivirga sp. IMCC43871 3391575 Bacteria Bacteria 100 4.34e-17   NTclustered gi|2890853429|gb|CP177355.1| 3391575 g193126 i0 92.754 7.04635761589404 69 5 46 0 81 149 2008696 2008764 Rubrivirga sp. IMCC43871 chromosome, complete genome blastn 1064 100 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC43871
7195064 7195064 PRJNA814235_P_NODE_183466_length_151_cov_4.640351_g182071_i0 PRJNA814235 183466 151 4.640351 7.00693001 Rubrivirga sp. IMCC45206 3391614 Bacteria Bacteria 89.8 9.39e-14   NTclustered gi|2890849321|gb|CP177357.1| 3391614 g182071 i0 86.585 0.543046357615894 82 10 54 1 69 149 1084148 1084067 Rubrivirga sp. IMCC45206 chromosome, complete genome blastn 82 89.8 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC45206
9745006 9745006 PRJNA814235_P_NODE_192008_length_151_cov_2.842105_g190613_i0 PRJNA814235 192008 151 2.842105 4.29157855 Rubrivirga sp. IMCC45206 3391614 Bacteria Bacteria 95.3 2.02e-15   NTclustered gi|2890849321|gb|CP177357.1| 3391614 g190613 i0 91.429 0.463576158940397 70 4 46 2 1 69 1389350 1389418 Rubrivirga sp. IMCC45206 chromosome, complete genome blastn 70 95.3 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC45206
17393601 17393601 PRJNA814235_P_NODE_109634_length_203_cov_2.078313_g108239_i0 PRJNA814235 109634 203 2.078313 4.21897539 Rhodocaloribacter litoris 2558931 Bacteria Bacteria 86.1 1.74e-12   NTclustered gi|2076465437|gb|CP076718.1| 2558931 g108239 i0 87.671 5.9064039408867 73 9 36 0 128 200 1494724 1494652 Rhodocaloribacter litoris strain ISCAR-4553 chromosome blastn 1199 86.1 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae Rhodocaloribacter Rhodocaloribacter litoris
21217495 21217495 PRJNA814235_P_NODE_121837_length_202_cov_3.284848_g120442_i0 PRJNA814235 121837 202 3.284848 6.63539296 Rhodocaloribacter litoris 2558931 Bacteria Bacteria 86.1 1.73e-12   NTclustered gi|2076465437|gb|CP076718.1| 2558931 g120442 i0 87.013 9.52970297029703 77 8 38 2 127 202 3221684 3221609 Rhodocaloribacter litoris strain ISCAR-4553 chromosome blastn 1925 86.1 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae Rhodocaloribacter Rhodocaloribacter litoris
21627459 21627459 PRJNA814235_P_NODE_104877_length_203_cov_2.234940_g103482_i0 PRJNA814235 104877 203 2.23494 4.5369282 Rhodothermales 1853224 Bacteria Bacteria 102 1.73e-17   NTclustered gi|1167574847|gb|CP020382.1| 1779382 g103482 i0 94.03 1.02955665024631 67 4 33 0 131 197 59897 59963 Rhodothermaceae bacterium RA chromosome, complete genome blastn 209 102 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae   Rhodothermaceae bacterium RA
22903034 22903034 PRJNA814235_P_NODE_101878_length_203_cov_2.361446_g100483_i0 PRJNA814235 101878 203 2.361446 4.79373538 Rubrivirga 1434037 Bacteria Bacteria 93.5 1.04e-14   NTclustered gi|2890853429|gb|CP177355.1| 3391575 g100483 i0 88.312 1.76847290640394 77 9 38 0 127 203 3532640 3532564 Rubrivirga sp. IMCC43871 chromosome, complete genome blastn 359 93.5 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC43871
25041535 25041535 PRJNA814235_P_NODE_106760_length_203_cov_2.168675_g105365_i0 PRJNA814235 106760 203 2.168675 4.40241025 Rubrivirga sp. IMCC45206 3391614 Bacteria Bacteria 78.7 2.92e-10   NTclustered gi|2890849321|gb|CP177357.1| 3391614 g105365 i0 94.231 1.54679802955665 52 2 26 1 18 69 779823 779873 Rubrivirga sp. IMCC45206 chromosome, complete genome blastn 314 78.7 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC45206

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;