RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA814235" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA814235 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4643797 4643797 PRJNA814235_P_NODE_113024_length_203_cov_1.993976_g111629_i0 PRJNA814235 113024 203 1.993976 4.04777128 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 100 6.23e-17   NTclustered gi|2874254031|emb|OY970356.1| 179883 g111629 i0 90.667 0.369458128078818 75 7 37 0 128 202 367273 367347 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD05684.bin.c.4 genome assembly, chromosome: 1 blastn 75 100 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
4645760 4645760 PRJNA814235_P_NODE_24684_length_384_cov_45.242075_g23314_i0 PRJNA814235 24684 384 45.242075 173.729568 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 632 1.0299999999999998e-176   NTclustered gi|1958122490|gb|CP065015.1| 2026720 g23314 i0 96.354 140.473958333333 384 14 100 0 1 384 511198 511581 Candidatus Saccharibacteria bacterium isolate Skiv_18-Q3-R9-52_BAT3C.188_fly chromosome, complete genome blastn 53942 632 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
7195683 7195683 PRJNA814235_P_NODE_31906_length_338_cov_9.235880_g30520_i0 PRJNA814235 31906 338 9.23588 31.2172744 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 442 1.6199999999999995e-119   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g30520 i0 90.294 69.0798816568047 340 30 100 3 1 338 666709 667047 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 23349 442 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
12295845 12295845 PRJNA814235_P_NODE_174070_length_156_cov_2.453782_g172675_i0 PRJNA814235 174070 156 2.453782 3.82789992 Candidatus Saccharibacteria bacterium oral taxon 955 2572087 Bacteria Bacteria 250 4.25e-62   NTclustered gi|1663049602|gb|CP040008.1| 2572087 g172675 i0 95.513 64.0448717948718 156 7 100 0 1 156 139585 139430 Candidatus Saccharibacteria bacterium oral taxon 955 strain PM004 chromosome, complete genome blastn 9991 250 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 955

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;