contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJNA814235" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 816964 | 816964 | PRJNA814235_P_NODE_191141_length_151_cov_2.921053_g189746_i0 | PRJNA814235 | 191141 | 151 | 2.921053 | 4.41079003 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 145 | 1.98e-30 | NTclustered | gi|1708575239|dbj|AP019834.1| | 157687 | g189746 | i0 | 100 | 4.56953642384106 | 78 | 0 | 100 | 0 | 1 | 78 | 1701750 | 1701827 | Leptotrichia wadei JMUB3933 DNA, complete genome | blastn | 690 | 145 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 3367898 | 3367898 | PRJNA814235_P_NODE_193663_length_151_cov_2.649123_g192268_i0 | PRJNA814235 | 193663 | 151 | 2.649123 | 4.00017573 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 139 | 9.19e-29 | NTclustered | gi|1276718681|gb|CP024704.1| | 2663009 | g192268 | i0 | 97.531 | 19.1523178807947 | 81 | 2 | 100 | 0 | 1 | 81 | 2170209 | 2170289 | Fusobacterium pseudoperiodonticum strain KCOM 2555 chromosome, complete genome | blastn | 2892 | 139 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 3369459 | 3369459 | PRJNA814235_P_NODE_80403_length_212_cov_1.925714_g79008_i0 | PRJNA814235 | 80403 | 212 | 1.925714 | 4.08251368 | Sneathia sanguinegens | 40543 | Bacteria | Bacteria | 392 | 9.67e-105 | NTclustered | gi|2769805188|gb|CP160095.1| | 40543 | g79008 | i0 | 100 | 402.561320754717 | 212 | 0 | 100 | 0 | 1 | 212 | 3243 | 3032 | Sneathia sanguinegens strain CCUG 41628T chromosome, complete genome | blastn | 85343 | 392 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | Sneathia sanguinegens | ||
| 3778523 | 3778523 | PRJNA814235_P_NODE_201983_length_150_cov_2.070796_g200588_i0 | PRJNA814235 | 201983 | 150 | 2.070796 | 3.106194 | Fusobacterium | 848 | Bacteria | Bacteria | 278 | 1.85e-70 | NTclustered | gi|2705003210|gb|CP084117.1| | 851 | g200588 | i0 | 100 | 100 | 150 | 0 | 100 | 0 | 1 | 150 | 624937 | 625086 | Fusobacterium nucleatum strain KCOM3486 chromosome, complete genome | blastn | 15000 | 278 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 3778667 | 3778667 | PRJNA814235_P_NODE_29463_length_352_cov_5.441270_g28080_i0 | PRJNA814235 | 29463 | 352 | 5.44127 | 19.1532704 | Fusobacterium | 848 | Bacteria | Bacteria | 575 | 1.5999999999999995e-159 | NTclustered | gi|2705020071|gb|CP084132.1| | 851 | g28080 | i0 | 96.067 | 487.985795454545 | 356 | 3 | 100 | 2 | 1 | 352 | 107952 | 107604 | Fusobacterium nucleatum strain KCOM3713 chromosome, complete genome | blastn | 171771 | 575 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 7604608 | 7604608 | PRJNA814235_P_NODE_191446_length_151_cov_2.894737_g190051_i0 | PRJNA814235 | 191446 | 151 | 2.894737 | 4.37105287 | Fusobacterium | 848 | Bacteria | Bacteria | 141 | 2.56e-29 | NTclustered | gi|1208657894|gb|CP021934.1| | 76857 | g190051 | i0 | 100 | 78.0927152317881 | 76 | 0 | 100 | 0 | 1 | 76 | 1975349 | 1975424 | Fusobacterium nucleatum subsp. polymorphum strain KCOM 1260 (=ChDC F218) genome | blastn | 11792 | 141 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 8471705 | 8471705 | PRJNA814235_P_NODE_89187_length_203_cov_3.626506_g87792_i0 | PRJNA814235 | 89187 | 203 | 3.626506 | 7.36180718 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 141 | 3.67e-29 | NTclustered | gi|1708575239|dbj|AP019834.1| | 157687 | g87792 | i0 | 100 | 2.98522167487685 | 76 | 0 | 74 | 0 | 128 | 203 | 2194874 | 2194799 | Leptotrichia wadei JMUB3933 DNA, complete genome | blastn | 606 | 141 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 11019091 | 11019091 | PRJNA814235_P_NODE_113529_length_203_cov_1.975904_g112134_i0 | PRJNA814235 | 113529 | 203 | 1.975904 | 4.01108512 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 135 | 1.71e-27 | NTclustered | gi|1276709865|gb|CP024700.1| | 2663009 | g112134 | i0 | 98.684 | 40.0394088669951 | 76 | 1 | 75 | 0 | 128 | 203 | 750403 | 750328 | Fusobacterium pseudoperiodonticum strain KCOM 1263 chromosome, complete genome | blastn | 8128 | 135 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 12706036 | 12706036 | PRJNA814235_P_NODE_182750_length_151_cov_5.368421_g181355_i0 | PRJNA814235 | 182750 | 151 | 5.368421 | 8.10631571 | Fusobacterium | 848 | Bacteria | Bacteria | 135 | 1.19e-27 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g181355 | i0 | 98.684 | 18.5562913907285 | 76 | 1 | 100 | 0 | 1 | 76 | 2285801 | 2285726 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 2802 | 135 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 13979306 | 13979306 | PRJNA814235_P_NODE_102091_length_203_cov_2.349398_g100696_i0 | PRJNA814235 | 102091 | 203 | 2.349398 | 4.76927794 | Leptotrichia | 32067 | Bacteria | Bacteria | 139 | 1.3199999999999999e-28 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g100696 | i0 | 100 | 3.67487684729064 | 75 | 0 | 37 | 0 | 1 | 75 | 2187470 | 2187396 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 746 | 139 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 14843610 | 14843610 | PRJNA814235_P_NODE_124812_length_201_cov_2.207317_g123417_i0 | PRJNA814235 | 124812 | 201 | 2.207317 | 4.43670717 | Leptotrichia rugosa | 3239302 | Bacteria | Bacteria | 141 | 3.63e-29 | NTclustered | gi|2785246835|gb|CP165644.1| | 3239302 | g123417 | i0 | 100 | 2.2089552238806 | 76 | 0 | 74 | 0 | 126 | 201 | 1914458 | 1914533 | Leptotrichia sp. HSP-334 chromosome, complete genome | blastn | 444 | 141 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia rugosa | ||
| 16118709 | 16118709 | PRJNA814235_P_NODE_153573_length_171_cov_3.067164_g152178_i0 | PRJNA814235 | 153573 | 171 | 3.067164 | 5.24485044 | Fusobacterium vincentii | 155615 | Bacteria | Bacteria | 311 | 2.14e-80 | NTclustered | gi|2706043502|gb|CP077176.1| | 155615 | g152178 | i0 | 99.415 | 471 | 171 | 1 | 100 | 0 | 1 | 171 | 350141 | 350311 | Fusobacterium vincentii strain SB037 chromosome, complete genome | blastn | 80541 | 311 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium vincentii | ||
| 16119477 | 16119477 | PRJNA814235_P_NODE_186353_length_151_cov_3.605263_g184958_i0 | PRJNA814235 | 186353 | 151 | 3.605263 | 5.44394713 | Sneathia vaginalis | 187101 | Bacteria | Bacteria | 213 | 5.34e-51 | NTclustered | gi|2769795739|gb|CP160094.1| | 187101 | g184958 | i0 | 91.411 | 3.23841059602649 | 163 | 2 | 100 | 2 | 1 | 151 | 561393 | 561555 | Sneathia vaginalis strain CCUG_64370 chromosome, complete genome | blastn | 489 | 213 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | Sneathia vaginalis | ||
| 17396018 | 17396018 | PRJNA814235_P_NODE_39414_length_304_cov_3.071161_g38023_i0 | PRJNA814235 | 39414 | 304 | 3.071161 | 9.33632944 | Fusobacterium mortiferum | 850 | Bacteria | Bacteria | 529 | 1.0699999999999996e-145 | NTclustered | gi|1370540179|gb|CP028102.1| | 469616 | g38023 | i0 | 98.026 | 413.595394736842 | 304 | 6 | 100 | 0 | 1 | 304 | 105483 | 105786 | Fusobacterium mortiferum ATCC 9817 chromosome, complete genome | blastn | 125733 | 529 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium mortiferum | ||
| 17804539 | 17804539 | PRJNA814235_P_NODE_40434_length_300_cov_3.505703_g39043_i0 | PRJNA814235 | 40434 | 300 | 3.505703 | 10.517109 | Fusobacterium | 848 | Bacteria | Bacteria | 536 | 6.319999999999997e-148 | NTclustered | gi|2705042081|gb|CP085192.1| | 856 | g39043 | i0 | 99 | 513.01 | 300 | 2 | 100 | 1 | 1 | 300 | 3422599 | 3422301 | Fusobacterium varium strain SB069 chromosome | blastn | 153903 | 536 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium | ||
| 18668397 | 18668397 | PRJNA814235_P_NODE_191155_length_151_cov_2.921053_g189760_i0 | PRJNA814235 | 191155 | 151 | 2.921053 | 4.41079003 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 135 | 1.19e-27 | NTclustered | gi|2706501616|gb|CP084155.1| | 76857 | g189760 | i0 | 98.684 | 0.503311258278146 | 76 | 1 | 50 | 0 | 1 | 76 | 11929 | 12004 | Fusobacterium polymorphum strain KCOM2517 plasmid pKCOM2517, complete sequence | blastn | 76 | 135 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 19078491 | 19078491 | PRJNA814235_P_NODE_30675_length_345_cov_5.935065_g29291_i0 | PRJNA814235 | 30675 | 345 | 5.935065 | 20.47597425 | Fusobacterium | 848 | Bacteria | Bacteria | 531 | 3.439999999999999e-146 | NTclustered | gi|2705040003|gb|CP084146.1| | 851 | g29291 | i0 | 94.302 | 488.805797101449 | 351 | 12 | 100 | 5 | 1 | 345 | 601985 | 602333 | Fusobacterium nucleatum strain KCOM2939 chromosome, complete genome | blastn | 168638 | 531 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 21217200 | 21217200 | PRJNA814235_P_NODE_101697_length_203_cov_2.367470_g100302_i0 | PRJNA814235 | 101697 | 203 | 2.36747 | 4.8059641 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 141 | 3.67e-29 | NTclustered | gi|2078816781|gb|CP071094.1| | 76857 | g100302 | i0 | 100 | 17.7832512315271 | 76 | 0 | 75 | 0 | 128 | 203 | 331279 | 331204 | Fusobacterium polymorphum strain THCT15E1 chromosome, complete genome | blastn | 3610 | 141 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 25043203 | 25043203 | PRJNA814235_P_NODE_184400_length_151_cov_4.140351_g183005_i0 | PRJNA814235 | 184400 | 151 | 4.140351 | 6.25193001 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 215 | 1.49e-51 | NTclustered | gi|2706056059|gb|CP077188.1| | 76857 | g183005 | i0 | 91.515 | 109.192052980132 | 165 | 0 | 100 | 1 | 1 | 151 | 2089444 | 2089280 | Fusobacterium polymorphum strain SB028 chromosome, complete genome | blastn | 16488 | 215 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 25043458 | 25043458 | PRJNA814235_P_NODE_199100_length_150_cov_3.247788_g197705_i0 | PRJNA814235 | 199100 | 150 | 3.247788 | 4.871682 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 84.2 | 4.33e-12 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g197705 | i0 | 86.667 | 0.5 | 75 | 10 | 50 | 0 | 1 | 75 | 565109 | 565035 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 75 | 84.2 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;