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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA814235" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 11 ✖

bioproject 1

  • PRJNA814235 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
815164 815164 PRJNA814235_P_NODE_104721_length_203_cov_2.240964_g103326_i0 PRJNA814235 104721 203 2.240964 4.54915692 Dictydiaethalium plumbeum 1334544 Evosea other_Eukaryota 121 4.78e-23   NTclustered gi|2250222224|gb|ON713348.1| 1334544 g103326 i0 95.946 36.0492610837438 74 3 36 0 128 201 1542 1469 Dictydiaethalium plumbeum voucher MA64421 small subunit ribosomal RNA gene, partial sequence blastn 7318 121 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Liceales Dictydiaethaliaceae Dictydiaethalium Dictydiaethalium plumbeum
817670 817670 PRJNA814235_P_NODE_41901_length_295_cov_2.488372_g40510_i0 PRJNA814235 41901 295 2.488372 7.3406974 Polyschismium peyerimhoffii 2911783 Evosea other_Eukaryota 278 4.15e-70   NTclustered gi|2161226355|gb|MZ313553.1| 2911783 g40510 i0 83.838 7.06779661016949 297 42 99 6 3 295 6421 6715 Polyschismium peyerimhoffii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2085 278 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Polyschismium Polyschismium peyerimhoffii
818281 818281 PRJNA814235_P_NODE_68561_length_230_cov_2.134715_g67166_i0 PRJNA814235 68561 230 2.134715 4.9098445 Arcyria denudata 283669 Evosea other_Eukaryota 207 4.14e-49   NTclustered gi|66356281|gb|AY643825.1| 283669 g67166 i0 94.118 33.6347826086957 136 8 59 0 3 138 1257 1392 Arcyria denudata small subunit ribosomal RNA gene, complete sequence blastn 7736 207 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Arcyria Arcyria denudata
4643592 4643592 PRJNA814235_P_NODE_100404_length_203_cov_2.427711_g99009_i0 PRJNA814235 100404 203 2.427711 4.92825333 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 62.1 2.94e-5   NTclustered gi|470436007|ref|XM_004338790.1| 1257118 g99009 i0 91.111 0.221674876847291 45 4 22 0 140 184 291 247 Acanthamoeba castellanii str. Neff sulfate adenylyltransferase (ACA1_383580), partial mRNA blastn 45 62.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8471132 8471132 PRJNA814235_P_NODE_63367_length_239_cov_2.361386_g61973_i0 PRJNA814235 63367 239 2.361386 5.64371254 Tychosporium acutostipes 668358 Evosea other_Eukaryota 431 2.3599999999999996e-116   NTclustered gi|256550196|gb|FJ792704.1| 668358 g61973 i0 99.167 3.75732217573222 240 1 100 1 1 239 626 865 Tychosporium acutostipes strain NZ05-15a small subunit ribosomal RNA gene, partial sequence blastn 898 431 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida   Tychosporium Tychosporium acutostipes
11022097 11022097 PRJNA814235_P_NODE_67909_length_231_cov_2.273196_g66514_i0 PRJNA814235 67909 231 2.273196 5.25108276 Tychosporium acutostipes 668358 Evosea other_Eukaryota 405 1.38e-108   NTclustered gi|256550196|gb|FJ792704.1| 668358 g66514 i0 98.268 46.2510822510823 231 4 100 0 1 231 370 140 Tychosporium acutostipes strain NZ05-15a small subunit ribosomal RNA gene, partial sequence blastn 10684 405 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida   Tychosporium Tychosporium acutostipes
13571860 13571860 PRJNA814235_P_NODE_67931_length_231_cov_2.206186_g66536_i0 PRJNA814235 67931 231 2.206186 5.09628966 Arcyria denudata 283669 Evosea other_Eukaryota 224 4.129999999999999e-54   NTclustered gi|66356281|gb|AY643825.1| 283669 g66536 i0 85.581 31.004329004329 215 29 93 2 5 219 1480 1692 Arcyria denudata small subunit ribosomal RNA gene, complete sequence blastn 7162 224 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Arcyria Arcyria denudata
15254023 15254023 PRJNA814235_P_NODE_145212_length_179_cov_1.542254_g143817_i0 PRJNA814235 145212 179 1.542254 2.76063466 Physariida 5789 Evosea other_Eukaryota 331 1.74e-86   NTclustered gi|2270227767|gb|ON973803.1| 159720 g143817 i0 100 56.5865921787709 179 0 100 0 1 179 402 224 Fuligo septica isolate NJ2-2 small subunit ribosomal RNA gene, partial sequence blastn 10129 331 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
17803802 17803802 PRJNA814235_P_NODE_163874_length_163_cov_2.587302_g162479_i0 PRJNA814235 163874 163 2.587302 4.21730226 Ischnamoeba 1654994 Evosea other_Eukaryota 296 5.68e-76   NTclustered gi|821394123|gb|KP864092.1| 1654995 g162479 i0 99.387 95.3496932515337 163 1 100 0 1 163 1023 861 Ischnamoeba montana isolate Tib85 small subunit ribosomal RNA gene, partial sequence blastn 15542 296 1 Eukaryota Amoebozoa   Evosea Variosea     Ischnamoeba Ischnamoeba montana
19943420 19943420 PRJNA814235_P_NODE_180396_length_152_cov_3.600000_g179001_i0 PRJNA814235 180396 152 3.6 5.472 Entamoeba histolytica 5759 Evosea other_Eukaryota 135 1.2e-27   NTclustered gi|467633|emb|Z29969.1| 5759 g179001 i0 98.684 44.9144736842105 76 1 50 0 1 76 1694 1619 E.histolytica plasmid genes for ribosomal RNA and hemolysins HLY1, HLY5mc1 HLY5mc2 HLY4 blastn 6827 135 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
22495496 22495496 PRJNA814235_P_NODE_85438_length_205_cov_3.976190_g84043_i0 PRJNA814235 85438 205 3.97619 8.1511895 Centropyxis aerophila 2898874 Tubulinea other_Eukaryota 198 2.17e-46   NTclustered gi|2156866368|gb|OL677465.1| 2898874 g84043 i0 85.024 50.6682926829268 207 17 97 7 1 199 376 576 Centropyxis aerophila voucher R61 small subunit ribosomal RNA gene, partial sequence blastn 10387 198 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Centropyxidae Centropyxis Centropyxis aerophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;