RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA813520" and tax_superkingdom = "Viruses"

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tax_kingdom 2

tax_superkingdom 1

  • Viruses · 6 ✖

bioproject 1

  • PRJNA813520 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8468001 8468001 PRJNA813520_S_NODE_1107_length_335_cov_11.607843_g1060_i0 PRJNA813520 1107 335 11.607843 38.88627405 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.032   NTclustered gi|9964314|ref|NC_002520.1| 28321 g1060 i0 94.286 0.104477611940299 35 1 10 1 100 133 153475 153509 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei
12294274 12294274 PRJNA813520_S_NODE_1590_length_287_cov_4.693798_g1543_i0 PRJNA813520 1590 287 4.693798 13.47120026 Zebrafish jaw poxvirus RQ14 Viruses Viruses 156 1.97e-33   NTclustered gi|1998702321|dbj|LC613089.1| RQ14 g1543 i0 78.423 0.839721254355401 241 50 84 2 19 258 177567 177328 Carp edema virus FTI2020 DNA, complete genome blastn 241 156 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
14843191 14843191 PRJNA813520_S_NODE_4712_length_168_cov_1.496403_g4665_i0 PRJNA813520 4712 168 1.496403 2.51395704 Zebrafish jaw poxvirus RQ14 Viruses Viruses 106 1.07e-18   NTclustered gi|1998702321|dbj|LC613089.1| RQ14 g4665 i0 88.636 0.523809523809524 88 8 52 2 7 93 151932 151846 Carp edema virus FTI2020 DNA, complete genome blastn 88 106 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
16117576 16117576 PRJNA813520_S_NODE_1133_length_332_cov_10.009901_g1086_i0 PRJNA813520 1133 332 10.009901 33.23287132 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.009   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g1086 i0 100 0.171686746987952 29 0 9 0 301 329 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
16117580 16117580 PRJNA813520_S_NODE_2113_length_250_cov_10.533937_g2066_i0 PRJNA813520 2113 250 10.533937 26.3348425 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.006   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g2066 i0 100 0.228 29 0 12 0 219 247 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
19941684 19941684 PRJNA813520_S_NODE_336_length_562_cov_12.163227_g297_i0 PRJNA813520 336 562 12.163227 68.35733574 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.015   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g297 i0 100 0.0516014234875445 29 0 5 0 531 559 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;