RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA812715" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA812715 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3364412 3364412 PRJNA812715_P_NODE_48823_length_389_cov_0.974684_g47026_i0 PRJNA812715 48823 389 0.974684 3.79152076 Philodina citrina 468664 Rotifera other_Eukaryota 549 1.0799999999999997e-151   NTclustered gi|407227484|emb|FR856884.1| 468664 g47026 i0 92.288 7.02827763496144 389 27 99 3 2 389 2391 2005 Philodina citrina complete mitochondrial genome blastn 2734 549 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
4640492 4640492 PRJNA812715_P_NODE_112304_length_246_cov_0.890173_g110503_i0 PRJNA812715 112304 246 0.890173 2.18982558 Adineta ricciae 249248 Rotifera other_Eukaryota 422 1.47e-113   NTclustered gi|62362189|gb|AY942834.1| 249248 g110503 i0 97.561 1 246 6 100 0 1 246 54 299 Adineta ricciae amphiHMG1/2-like protein mRNA, partial cds blastn 246 422 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
12292911 12292911 PRJNA812715_P_NODE_54030_length_363_cov_1.062069_g52231_i0 PRJNA812715 54030 363 1.062069 3.85531047 Adineta vaga 104782 Rotifera other_Eukaryota 579 1.2799999999999996e-160   NTclustered gi|187233665|gb|EU643499.1| 104782 g52231 i0 95.568 0.994490358126722 361 16 99 0 1 361 391 31 Adineta vaga ribosomal protein L26 mRNA, partial cds blastn 361 579 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
16115258 16115258 PRJNA812715_P_NODE_26393_length_611_cov_2.671004_g24663_i0 PRJNA812715 26393 611 2.671004 16.31983444 Philodina citrina 468664 Rotifera other_Eukaryota 669 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g24663 i0 86.688 31.8330605564648 616 67 99 14 3 611 2393 1786 Philodina citrina complete mitochondrial genome blastn 19450 669 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
16527823 16527823 PRJNA812715_P_NODE_58773_length_343_cov_1.711111_g56974_i0 PRJNA812715 58773 343 1.711111 5.86911073 Ploima 84394 Rotifera other_Eukaryota 307 6.270000000000001e-79   NTclustered gi|1859640894|gb|MN970216.1| 360698 g56974 i0 83.235 86.7172011661808 340 52 99 5 1 338 12345 12009 Proales similis mitochondrion, complete genome blastn 29744 307 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
18663333 18663333 PRJNA812715_P_NODE_108215_length_248_cov_0.880000_g106414_i0 PRJNA812715 108215 248 0.88 2.1824 Adineta vaga 104782 Rotifera other_Eukaryota 453 5.2600000000000005e-123   NTclustered gi|259129963|gb|GQ398061.1| 104782 g106414 i0 99.597 4.10483870967742 248 1 100 0 1 248 10361 10114 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 1018 453 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
19940425 19940425 PRJNA812715_P_NODE_56576_length_352_cov_1.103943_g54777_i0 PRJNA812715 56576 352 1.103943 3.88587936 Monostyla sp. MPN-2013 1443992 Rotifera other_Eukaryota 259 1.83e-64   NTclustered gi|572455655|gb|KF159018.1| 1443992 g54777 i0 81.424 36.2272727272727 323 54 91 6 31 350 389 70 Monostyla sp. MPN-2013 methionine adenosyltransferase mRNA, partial cds blastn 12752 259 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Monostyla Monostyla sp. MPN-2013
22489644 22489644 PRJNA812715_P_NODE_27878_length_586_cov_1.491228_g26128_i0 PRJNA812715 27878 586 1.491228 8.73859608 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 237 1.49e-57   NTclustered gi|1800329609|gb|MN417951.1| 104777 g26128 i0 77.59 5.99488054607508 415 77 70 14 6 413 10240 9835 Brachionus calyciflorus chromosome I mitochondrion, complete sequence blastn 3513 237 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;