RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA812715" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA812715 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7603134 7603134 PRJNA812715_P_NODE_57006_length_350_cov_1.667870_g55207_i0 PRJNA812715 57006 350 1.66787 5.837545 Monocercomonoides 302781 Preaxostyla other_Eukaryota 392 1.72e-104   NTclustered gi|156708131|gb|EF474123.1| 302782 g55207 i0 88.379 92.9085714285714 327 36 93 2 25 350 1278 953 Monocercomonoides sp. PA clone 4/4 tubulin alpha subunit mRNA, complete cds blastn 32518 392 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides sp. PA
12291124 12291124 PRJNA812715_P_NODE_108490_length_248_cov_0.880000_g106689_i0 PRJNA812715 108490 248 0.88 2.1824 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 209 1.26e-49   NTclustered gi|2794954618|ref|XM_067872953.1| 2049356 g106689 i0 82.258 64.0201612903226 248 38 99 6 4 248 423 179 Monocercomonoides exilis conventional actin (MONOS_2989), mRNA blastn 15877 209 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
12291311 12291311 PRJNA812715_P_NODE_115690_length_244_cov_0.900585_g113889_i0 PRJNA812715 115690 244 0.900585 2.1974274 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 76.8 1.31e-9   NTclustered gi|2794977061|ref|XM_067879212.1| 2049356 g113889 i0 100 0.422131147540984 41 0 17 0 6 46 14274 14314 Monocercomonoides exilis putative Dual specificity phosphatase, catalytic domain (MONOS_8775), partial mRNA blastn 103 76.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
23766058 23766058 PRJNA812715_P_NODE_50019_length_382_cov_2.268608_g48222_i0 PRJNA812715 50019 382 2.268608 8.66608256 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 67.6 1.3e-6   NTclustered gi|2794958030|ref|XM_067876128.1| 2049356 g48222 i0 97.436 1.83507853403141 39 1 10 0 19 57 1463 1425 Monocercomonoides exilis uncharacterized protein (MONOS_5936), partial mRNA blastn 701 67.6 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;