RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA812715" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA812715 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9742503 9742503 PRJNA812715_P_NODE_78948_length_286_cov_1.446009_g77148_i0 PRJNA812715 78948 286 1.446009 4.13558574 Sycon ciliatum 27933 Porifera other_Eukaryota 178 4.18e-40   NTclustered gi|2732893162|ref|XM_065342676.1| 27933 g77148 i0 78.339 35.9615384615385 277 58 97 2 1 276 1151 876 PREDICTED: Sycon ciliatum calreticulin-like (LOC135830418), mRNA blastn 10285 178 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
16116542 16116542 PRJNA812715_P_NODE_64053_length_324_cov_1.840637_g62254_i0 PRJNA812715 64053 324 1.840637 5.96366388 Chondrilla caribensis 1336846 Porifera other_Eukaryota 130 1.37e-25   NTclustered gi|512765366|gb|KC869604.1| 1336846 g62254 i0 80.838 30.3148148148148 167 30 51 2 119 284 2836 3001 Chondrilla caribensis voucher P47 28S ribosomal RNA gene, partial sequence blastn 9822 130 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Chondrillida Chondrillidae Chondrilla Chondrilla caribensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;