RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA812715" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA812715 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2087529 2087529 PRJNA812715_P_NODE_106762_length_248_cov_2.605714_g104961_i0 PRJNA812715 106762 248 2.605714 6.46217072 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 259 1.23e-64   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g104961 i0 86.192 4.92741935483871 239 33 96 0 6 244 5154 5392 Stenostomum sthenum mitochondrion, complete genome blastn 1222 259 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
4643132 4643132 PRJNA812715_P_NODE_85444_length_276_cov_1.137931_g83643_i0 PRJNA812715 85444 276 1.137931 3.14068956 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.025   NTclustered gi|690658596|emb|LN207720.1| 99802 g83643 i0 96.774 0.22463768115942 31 1 11 0 235 265 1271 1301 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0174958 blastn 62 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
8465513 8465513 PRJNA812715_P_NODE_18447_length_808_cov_13.580952_g16886_i0 PRJNA812715 18447 808 13.580952 109.73409216 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 1288 0   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g16886 i0 95.432 26.3341584158416 810 33 100 4 1 808 8964 8157 Stenostomum sthenum mitochondrion, complete genome blastn 21278 1288 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
11017028 11017028 PRJNA812715_P_NODE_38249_length_461_cov_3.644330_g36459_i0 PRJNA812715 38249 461 3.64433 16.8003613 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 514 4.75e-141   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g36459 i0 86.9 78.353579175705 458 60 99 0 3 460 457 914 Stenostomum sthenum mitochondrion, complete genome blastn 36121 514 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
13565261 13565261 PRJNA812715_P_NODE_100431_length_252_cov_2.513966_g98630_i0 PRJNA812715 100431 252 2.513966 6.33519432 Brachylaima thompsoni 138588 Platyhelminthes Platyhelminthes 466 6.89e-127   NTclustered gi|31711564|gb|AY222085.1| 138588 g98630 i0 100 86.515873015873 252 0 100 0 1 252 657 908 Brachylaima thompsoni 18S ribosomal RNA gene, partial sequence blastn 21802 466 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Diplostomida Brachylaimidae Brachylaima Brachylaima thompsoni
16116294 16116294 PRJNA812715_P_NODE_56693_length_351_cov_2.115108_g54894_i0 PRJNA812715 56693 351 2.115108 7.42402908 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 58.4 7.13e-4   NTclustered gi|687277514|emb|LK436380.1| 57078 g54894 i0 86.207 0.925925925925926 58 3 15 4 247 300 215 271 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0041755 blastn 325 58.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;