RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA812715" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA812715 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2087891 2087891 PRJNA812715_P_NODE_120602_length_241_cov_1.375000_g118801_i0 PRJNA812715 120602 241 1.375 3.31375 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.022   NTclustered gi|2912981848|dbj|AP039587.1| 145626 g118801 i0 100 0.116182572614108 28 0 12 0 38 65 60624127 60624100 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 6, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
4641463 4641463 PRJNA812715_P_NODE_32224_length_524_cov_2.793792_g30451_i0 PRJNA812715 32224 524 2.793792 14.63947008 Aplysia californica 6500 Mollusca Mollusca 289 3.6e-73   NTclustered gi|1897919841|ref|XM_013080763.2| 6500 g30451 i0 78.889 81.7977099236641 450 77 84 17 71 511 502 62 PREDICTED: Aplysia californica 40S ribosomal protein S18 (LOC101863011), mRNA blastn 42862 289 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
5916410 5916410 PRJNA812715_P_NODE_34965_length_494_cov_1.059382_g33181_i0 PRJNA812715 34965 494 1.059382 5.23334708 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.004   NTclustered gi|2912999747|dbj|AP039606.1| 145626 g33181 i0 100 0.0607287449392713 30 0 6 0 311 340 46322434 46322405 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 25, sequence blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
9740176 9740176 PRJNA812715_P_NODE_117248_length_243_cov_0.905882_g115447_i0 PRJNA812715 117248 243 0.905882 2.20129326 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.022   NTclustered gi|2912999222|dbj|AP039605.1| 145626 g115447 i0 100 0.11522633744856 28 0 12 0 90 117 3230307 3230280 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 24, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
16115892 16115892 PRJNA812715_P_NODE_44553_length_414_cov_1.354839_g42757_i0 PRJNA812715 44553 414 1.354839 5.60903346 Mizuhopecten yessoensis 6573 Mollusca Mollusca 54.7 0.011   NTclustered gi|1207961858|ref|XM_021515645.1| 6573 g42757 i0 100 0.140096618357488 29 0 7 0 203 231 12225 12197 PREDICTED: Mizuhopecten yessoensis uncharacterized LOC110461911 (LOC110461911), transcript variant X1, mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
17390585 17390585 PRJNA812715_P_NODE_121374_length_241_cov_0.916667_g119573_i0 PRJNA812715 121374 241 0.916667 2.20916747 Argopecten irradians 31199 Mollusca Mollusca 150 7.48e-32   NTclustered gi|2835372062|ref|XM_069260327.1| 31199 g119573 i0 78.788 10.9792531120332 231 43 95 5 5 232 912 1139 PREDICTED: Argopecten irradians 26S proteasome regulatory subunit 6B (LOC138318169), transcript variant X2, mRNA blastn 2646 150 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
22490306 22490306 PRJNA812715_P_NODE_47938_length_393_cov_4.375000_g46141_i0 PRJNA812715 47938 393 4.375 17.19375 Magallana angulata 2784310 Mollusca Mollusca 69.4 3.73e-7   NTclustered gi|2416977037|ref|XM_052828112.1| 2784310 g46141 i0 84.932 0.987277353689567 73 5 17 4 296 362 2186 2258 PREDICTED: Crassostrea angulata fibroin heavy chain-like (LOC128164320), mRNA blastn 388 69.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana angulata
23767427 23767427 PRJNA812715_P_NODE_96879_length_258_cov_1.335135_g95078_i0 PRJNA812715 96879 258 1.335135 3.4446483 Bradybaena similaris 145626 Mollusca Mollusca 63.9 1.08e-5   NTclustered gi|2912991694|dbj|AP039596.1| 145626 g95078 i0 100 122.821705426357 34 0 14 0 1 34 45637449 45637482 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 15, sequence blastn 31688 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;