RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA812715" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA812715 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13565952 13565952 PRJNA812715_P_NODE_1311_length_3461_cov_142.013872_g1170_i0 PRJNA812715 1311 3461 142.013872 4915.10010992 Pleistophora mulleri 249366 Fungi Fungi 3616 0   NTclustered gi|134147422|gb|EF119339.1| 249366 g1170 i0 86.988 47.8139266108061 3274 342 93 61 247 3460 1 3250 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 165484 3616 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
14840362 14840362 PRJNA812715_P_NODE_122552_length_237_cov_3.280488_g120751_i0 PRJNA812715 122552 237 3.280488 7.77475656 Vittaforma corneae 42399 Fungi Fungi 239 1.52e-58   NTclustered gi|667639983|ref|XR_552275.1| 993615 g120751 i0 86.425 30.4599156118143 221 26 92 3 21 237 226 446 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 7219 239 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
16115505 16115505 PRJNA812715_P_NODE_33253_length_512_cov_2.678815_g31474_i0 PRJNA812715 33253 512 2.678815 13.7155328 Enterocytozoon sp. ex Acetes sibogae australis 2881109 Fungi Fungi 584 3.9999999999999983e-162   NTclustered gi|2108103202|gb|OK413268.1| 2881109 g31474 i0 88.613 100.2890625 483 52 99 2 1 483 247 726 Enterocytozoon sp. ex Acetes sibogae australis isolate RA19015_21 small subunit ribosomal RNA gene, partial sequence blastn 51348 584 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Enterocytozoon Enterocytozoon sp. ex Acetes sibogae australis
19939502 19939502 PRJNA812715_P_NODE_28536_length_575_cov_1.679283_g26779_i0 PRJNA812715 28536 575 1.679283 9.65587725 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 309 3.05e-79   NTclustered gi|2522768008|gb|OR162445.1| 646526 g26779 i0 81.36 3.6295652173913 397 52 99 13 182 575 2533 2910 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2087 309 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;