RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA812715" and tax_phylum = "Duplornaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA812715 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23767089 23767089 PRJNA812715_P_NODE_84959_length_276_cov_2.502463_g83158_i0 PRJNA812715 84959 276 2.502463 6.90679788 Henan cystovirus 3 2824305 Viruses Viruses 361 3.7099999999999996e-95   NTclustered gi|2075443683|gb|MW897002.1| 2824305 g83158 i0 90.217 1 276 27 100 0 1 276 583 308 MAG: Henan cystovirus 3 isolate 265-k141_5132 hypothetical protein 1, putative RNA-dependent RNA polymerase, and hypothetical protein 2 genes, complete cds; and hypothetical protein 3 gene, partial cds blastn 276 361 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Henan cystovirus 3

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;