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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA812715" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA812715 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
813646 813646 PRJNA812715_P_NODE_52501_length_370_cov_0.824916_g50703_i0 PRJNA812715 52501 370 0.824916 3.0521892 Polychytrium aggregatum 110093 Fungi Fungi 202 3.3e-47   NTclustered gi|2432161565|ref|XM_053111915.1| 110093 g50703 i0 83.796 52.9405405405405 216 31 58 2 7 220 94 307 Polychytrium aggregatum ribosomal protein S17e (BJ171DRAFT_515216), mRNA blastn 19588 202 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
2089070 2089070 PRJNA812715_P_NODE_43982_length_417_cov_9.895349_g42187_i0 PRJNA812715 43982 417 9.895349 41.26360533 Spizellomyces punctatus 109760 Fungi Fungi 283 1.31e-71   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g42187 i0 94.086 54.4196642685851 186 11 45 0 1 186 3852 4037 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 22693 283 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
7189981 7189981 PRJNA812715_P_NODE_105426_length_249_cov_1.238636_g103625_i0 PRJNA812715 105426 249 1.238636 3.08420364 Neocallimastix patriciarum 4758 Fungi Fungi 71.3 6.22e-8   NTclustered gi|560648|gb|S71569.1| 4758 g103625 i0 93.617 0.365461847389558 47 3 19 0 165 211 2513 2559 xynB=Xylanase B [Neocallimastix patriciarum, mRNA, 2819 nt] blastn 91 71.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix patriciarum
7602936 7602936 PRJNA812715_P_NODE_22526_length_693_cov_5.335484_g20847_i0 PRJNA812715 22526 693 5.335484 36.97490412 Gallinipes 2304323 Fungi Fungi 545 2.6e-150   NTclustered gi|1866582577|gb|MT730752.1| 117822 g20847 i0 87.169 76.9033189033189 491 49 77 10 1 490 3926 4403 Gallinipes pseudodichotomus isolate JEL0583 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 53294 545 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Gallinipes Gallinipes pseudodichotomus
8466641 8466641 PRJNA812715_P_NODE_53467_length_365_cov_1.880137_g51668_i0 PRJNA812715 53467 365 1.880137 6.86250005 Gorgonomyces haynaldii 382530 Fungi Fungi 472 2.24e-128   NTclustered gi|1866582436|gb|MT730611.1| 382530 g51668 i0 90.411 100.117808219178 365 26 100 6 1 365 1595 1240 Gorgonomyces haynaldii isolate ARG036 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 36543 472 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Gorgonomycetaceae Gorgonomyces Gorgonomyces haynaldii
11016377 11016377 PRJNA812715_P_NODE_18189_length_818_cov_3.495302_g16636_i0 PRJNA812715 18189 818 3.495302 28.59157036 Rhizophydium sphaerotheca 109902 Fungi Fungi 185 7.769999999999998e-42   NTclustered gi|82398246|gb|DQ273781.1| 109902 g16636 i0 80.534 14.8545232273839 262 34 30 8 7 252 2006 1746 Rhizophydium sphaerotheca isolate AFTOL-ID 37 28S ribosomal RNA gene, partial sequence blastn 12151 185 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Rhizophydiaceae Rhizophydium Rhizophydium sphaerotheca
13568451 13568451 PRJNA812715_P_NODE_93031_length_264_cov_1.073298_g91230_i0 PRJNA812715 93031 264 1.073298 2.83350672 Synchytrium microbalum 1806994 Fungi Fungi 239 1.72e-58   NTclustered gi|1759163857|ref|XM_031171354.1| 1806994 g91230 i0 83.019 145.147727272727 265 43 100 2 1 264 2760 2497 Synchytrium microbalum uncharacterized protein (SmJEL517_g05428), partial mRNA blastn 38319 239 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
21216465 21216465 PRJNA812715_P_NODE_74417_length_295_cov_0.873874_g72617_i0 PRJNA812715 74417 295 0.873874 2.5779283 Fimicolochytrium jonesii 1396493 Fungi Fungi 193 1.55e-44   NTclustered gi|2432058109|ref|XM_053065686.1| 1396493 g72617 i0 79.926 5.9864406779661 269 48 90 5 1 266 477 212 Fimicolochytrium jonesii elongation factor alpha-like protein (EV422DRAFT_244629), mRNA blastn 1766 193 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;