contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA812715" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 812723 | 812723 | PRJNA812715_P_NODE_24581_length_647_cov_65.391986_g22874_i0 | PRJNA812715 | 24581 | 647 | 65.391986 | 423.08614942 | Arcobacter iocasae | 2906515 | Bacteria | Bacteria | 54.7 | 0.018 | NTclustered | gi|2809047151|gb|CP090177.1| | 2906515 | g22874 | i0 | 100 | 0.044822256568779 | 29 | 0 | 4 | 0 | 97 | 125 | 1017122 | 1017150 | Arcobacter sp. KX21116 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter iocasae | ||
| 3776836 | 3776836 | PRJNA812715_P_NODE_46543_length_401_cov_2.387195_g44746_i0 | PRJNA812715 | 46543 | 401 | 2.387195 | 9.57265195 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 721 | 0 | NTclustered | gi|972494020|gb|CP010483.1| | 197 | g44746 | i0 | 99.007 | 85.428927680798 | 403 | 2 | 100 | 2 | 1 | 401 | 1633230 | 1633632 | Campylobacter jejuni strain CJ677CC535, complete genome | blastn | 34257 | 721 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 13565688 | 13565688 | PRJNA812715_P_NODE_116171_length_244_cov_0.900585_g114370_i0 | PRJNA812715 | 116171 | 244 | 0.900585 | 2.1974274 | Campylobacter concisus | 199 | Bacteria | Bacteria | 412 | 8.759999999999998e-111 | NTclustered | gi|1935888393|gb|CP049239.1| | 199 | g114370 | i0 | 97.131 | 12.844262295082 | 244 | 7 | 100 | 0 | 1 | 244 | 591415 | 591658 | Campylobacter concisus strain P3UCO1 chromosome, complete genome | blastn | 3134 | 412 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 17802958 | 17802958 | PRJNA812715_P_NODE_98774_length_255_cov_1.527473_g96973_i0 | PRJNA812715 | 98774 | 255 | 1.527473 | 3.89505615 | Aliarcobacter | 2321111 | Bacteria | Bacteria | 449 | 7.03e-122 | NTclustered | gi|1817415496|gb|CP026656.1| | 28198 | g96973 | i0 | 98.431 | 49.8313725490196 | 255 | 4 | 100 | 0 | 1 | 255 | 1591014 | 1590760 | Aliarcobacter cryaerophilus strain M830MA chromosome, complete genome | blastn | 12707 | 449 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter cryaerophilus | ||
| 18665172 | 18665172 | PRJNA812715_P_NODE_55055_length_358_cov_1.621053_g53256_i0 | PRJNA812715 | 55055 | 358 | 1.621053 | 5.80336974 | Halarcobacter mediterraneus | 2023153 | Bacteria | Bacteria | 71.3 | 9.36e-8 | NTclustered | gi|2621784616|emb|OY781074.1| | 2023153 | g53256 | i0 | 90.566 | 0.547486033519553 | 53 | 5 | 15 | 0 | 125 | 177 | 6388 | 6336 | MAG: Halarcobacter mediterraneus isolate a5fc0a89-db13-449e-aec2-f9d0956b3340 genome assembly, chromosome: 1 | blastn | 196 | 71.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Halarcobacter | Halarcobacter mediterraneus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;