RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA812715" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Annelida · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA812715 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2087477 2087477 PRJNA812715_P_NODE_105002_length_249_cov_1.750000_g103201_i0 PRJNA812715 105002 249 1.75 4.3575 Ailoscolex lacteospumosus 1046305 Annelida Annelida 54.7 0.006   NTclustered gi|2920003257|emb|OZ238860.1| 1046305 g103201 i0 96.97 1.03212851405622 33 0 13 1 77 109 48472430 48472399 Ailoscolex lacteospumosus genome assembly, chromosome: 1 blastn 257 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
3365229 3365229 PRJNA812715_P_NODE_7543_length_1543_cov_7.972109_g6722_i0 PRJNA812715 7543 1543 7.972109 123.00964187 Ailoscolex lacteospumosus 1046305 Annelida Annelida 65.8 2.04e-5   NTclustered gi|2920003371|emb|OZ238862.1| 1046305 g6722 i0 95.122 0.499027867790019 41 2 3 0 679 719 37222131 37222091 Ailoscolex lacteospumosus genome assembly, chromosome: 3 blastn 770 65.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
7602771 7602771 PRJNA812715_P_NODE_105166_length_249_cov_1.687500_g103365_i0 PRJNA812715 105166 249 1.6875 4.201875 Clitellata 42113 Annelida Annelida 63.9 1.04e-5   NTclustered gi|2918369697|emb|OZ237786.1| 311461 g103365 i0 100 207.409638554217 34 0 15 0 74 107 9403248 9403215 Hirudo verbana genome assembly, chromosome: 8 blastn 51645 63.9 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
13566594 13566594 PRJNA812715_P_NODE_32371_length_523_cov_1.395556_g30598_i0 PRJNA812715 32371 523 1.395556 7.29875788 Hirudo verbana 311461 Annelida Annelida 54.7 0.014   NTclustered gi|2918369620|emb|OZ237782.1| 311461 g30598 i0 100 0.110898661567878 29 0 6 0 2 30 1291666 1291694 Hirudo verbana genome assembly, chromosome: 4 blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;