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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA812715" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 18 ✖

bioproject 1

  • PRJNA812715 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
814231 814231 PRJNA812715_P_NODE_70701_length_304_cov_2.662338_g68901_i0 PRJNA812715 70701 304 2.662338 8.09350752 Protostelium mycophagum 472931 Evosea other_Eukaryota 279 1.19e-70   NTclustered gi|262262910|gb|FJ766453.1| 472931 g68901 i0 83.388 47.3059210526316 307 46 100 5 1 304 341 37 Protostelium mycophagum strain OMBS04-1-1 small subunit ribosomal RNA gene, partial sequence blastn 14381 279 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
814796 814796 PRJNA812715_P_NODE_90901_length_267_cov_1.525773_g89100_i0 PRJNA812715 90901 267 1.525773 4.07381391 Dictyostelium discoideum 44689 Evosea other_Eukaryota 56.5 0.002   NTclustered gi|66800340|ref|XM_629094.1| 352472 g89100 i0 92.5 0.149812734082397 40 2 15 1 73 112 2149 2111 Dictyostelium discoideum AX4 Vps52 / Sac2 family protein (vps52B) mRNA, complete cds blastn 40 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
2088865 2088865 PRJNA812715_P_NODE_37942_length_464_cov_1.946292_g36153_i0 PRJNA812715 37942 464 1.946292 9.03079488 Badhamia utricularis 289938 Evosea other_Eukaryota 634 3.5199999999999993e-177   NTclustered gi|2473570299|gb|OQ727553.1| 289938 g36153 i0 91.042 69.2801724137931 480 27 100 11 1 464 692 1171 Badhamia utricularis voucher MdH1510013_XBU12 small subunit ribosomal RNA gene, partial sequence blastn 32146 634 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Badhamia Badhamia utricularis
2089767 2089767 PRJNA812715_P_NODE_65982_length_318_cov_1.175510_g64182_i0 PRJNA812715 65982 318 1.17551 3.7381218 Heterostelium album 2086695 Evosea other_Eukaryota 185 2.8199999999999994e-42   NTclustered gi|1160570294|ref|XM_020574641.1| 670386 g64182 i0 88.742 36.5345911949686 151 17 47 0 5 155 417 267 Polysphondylium pallidum PN500 ribosomal protein S2 (rps2), partial mRNA blastn 11618 185 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
3362998 3362998 PRJNA812715_P_NODE_118563_length_242_cov_1.473373_g116762_i0 PRJNA812715 118563 242 1.473373 3.56556266 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 363 8.869999999999999e-96   NTclustered gi|470441095|ref|XM_004339332.1| 1257118 g116762 i0 95.575 1.33471074380165 226 10 93 0 17 242 1 226 Acanthamoeba castellanii str. Neff carbohydrate binding domain cbm49 protein (ACA1_061050), partial mRNA blastn 323 363 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3363597 3363597 PRJNA812715_P_NODE_24383_length_652_cov_0.929188_g22679_i0 PRJNA812715 24383 652 0.929188 6.05830576 Dictyostelium purpureum 5786 Evosea other_Eukaryota 54.7 0.018   NTclustered gi|330801709|ref|XM_003288819.1| 5786 g22679 i0 100 0.044478527607362 29 0 4 0 161 189 1240 1212 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_15792), partial mRNA blastn 29 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
5052844 5052844 PRJNA812715_P_NODE_120644_length_241_cov_1.327381_g118843_i0 PRJNA812715 120644 241 1.327381 3.19898821 Badhamia 227448 Evosea other_Eukaryota 418 1.8599999999999995e-112   NTclustered gi|374255697|emb|HE614597.1| 289938 g118843 i0 97.925 99.6224066390042 241 5 100 0 1 241 1346 1586 Badhamia utricularis partial 18S rRNA gene, strain USA blastn 24009 418 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Badhamia Badhamia utricularis
10153587 10153587 PRJNA812715_P_NODE_48168_length_392_cov_2.037618_g46371_i0 PRJNA812715 48168 392 2.037618 7.98746256 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 503 8.61e-138   NTclustered gi|1042160935|dbj|LC102274.1| 1789826 g46371 i0 89.796 95.8392857142857 392 40 100 0 1 392 580 189 Copromyxa sp. MK-2016 gene for actin, partial cds, strain: ZEB1_cl3 blastn 37569 508 0.990157480314961 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa laresi
11018510 11018510 PRJNA812715_P_NODE_88429_length_271_cov_1.525253_g86628_i0 PRJNA812715 88429 271 1.525253 4.13343563 Dianema mongolicum 2951076 Evosea other_Eukaryota 424 4.57e-114   NTclustered gi|2250222330|gb|ON713413.1| 2951076 g86628 i0 95.167 26.309963099631 269 11 99 2 4 271 237 504 Dianema mongolicum voucher MM45002 small subunit ribosomal RNA gene, partial sequence blastn 7130 424 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Dianemataceae Dianema Dianema mongolicum
12291045 12291045 PRJNA812715_P_NODE_105450_length_249_cov_1.119318_g103649_i0 PRJNA812715 105450 249 1.119318 2.78710182 Fuligo septica 159720 Evosea other_Eukaryota 403 5.3999999999999986e-108   NTclustered gi|37515398|emb|AJ584697.1| 159720 g103649 i0 95.984 34.8353413654619 249 8 100 2 1 249 6112 6358 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 8674 403 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
12294169 12294169 PRJNA812715_P_NODE_96390_length_259_cov_0.817204_g94589_i0 PRJNA812715 96390 259 0.817204 2.11655836 Didymium iridis 5793 Evosea other_Eukaryota 302 2.1200000000000002e-77   NTclustered gi|2687|emb|X60210.1| 5793 g94589 i0 87.925 20.9227799227799 265 21 100 8 1 259 1786 1527 D.iridis LSU rRNA gene blastn 5419 302 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
14841885 14841885 PRJNA812715_P_NODE_56032_length_354_cov_1.498221_g54233_i0 PRJNA812715 56032 354 1.498221 5.30370234 Acytostelium subglobosum 361139 Evosea other_Eukaryota 156 2.48e-33   NTclustered gi|831754058|ref|XM_012892546.1| 1410327 g54233 i0 82.857 2.98870056497175 175 28 49 2 181 354 672 499 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 1058 156 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
17802337 17802337 PRJNA812715_P_NODE_118674_length_242_cov_1.366864_g116873_i0 PRJNA812715 118674 242 1.366864 3.30781088 Dictyostelium 5782 Evosea other_Eukaryota 54.7 0.006   NTclustered gi|974333|gb|U32174.1|DDU32174 44689 g116873 i0 96.875 0.264462809917355 32 1 13 0 201 232 2563 2532 Dictyostelium discoideum spore lysis A (splA) gene, complete cds blastn 64 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
18663782 18663782 PRJNA812715_P_NODE_124235_length_227_cov_2.974026_g122434_i0 PRJNA812715 124235 227 2.974026 6.75103902 Reticularia olivacea 1706842 Evosea other_Eukaryota 414 2.2399999999999998e-111   NTclustered gi|2462729552|gb|OQ658907.1| 1706842 g122434 i0 100 2.56828193832599 224 0 99 0 1 224 113 336 Reticularia olivacea voucher LE325311 small subunit ribosomal RNA gene, partial sequence blastn 583 414 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Liceales Reticulariaceae Reticularia Reticularia olivacea
18663830 18663830 PRJNA812715_P_NODE_13295_length_1042_cov_3.733746_g11986_i0 PRJNA812715 13295 1042 3.733746 38.90563332 Copromyxa protea 931554 Tubulinea other_Eukaryota 776 0   NTclustered gi|508737347|dbj|AB766053.1| 931554 g11986 i0 81.282 0.943378119001919 983 163 93 16 1 968 409 1385 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 983 776 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
18666322 18666322 PRJNA812715_P_NODE_93395_length_263_cov_1.621053_g91594_i0 PRJNA812715 93395 263 1.621053 4.26336939 Amoebozoa sp. 1892891 Root_unresolved Root_unresolved 244 3.69e-60   NTclustered gi|2651357789|gb|PP174304.1| 1892891 g91594 i0 94.34 59.828897338403 159 9 60 0 105 263 3261 3419 Amoebozoa sp. isolate 114_WLI small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15735 244 1 Eukaryota Amoebozoa             Amoebozoa sp.
19938479 19938479 PRJNA812715_P_NODE_106816_length_248_cov_2.274286_g105015_i0 PRJNA812715 106816 248 2.274286 5.64022928 Paradermamoeba levis 1072175 Discosea other_Eukaryota 353 5.49e-93   NTclustered gi|342309910|gb|JN247435.1| 1072175 g105015 i0 92.742 49.5846774193548 248 12 100 4 1 248 427 186 Paradermamoeba levis 18S ribosomal RNA gene, partial sequence; mitochondrial blastn 12297 353 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Paradermamoeba Paradermamoeba levis
19940622 19940622 PRJNA812715_P_NODE_62816_length_328_cov_2.662745_g61017_i0 PRJNA812715 62816 328 2.662745 8.7338036 Physarum polycephalum 5791 Evosea other_Eukaryota 523 5.439999999999999e-144   NTclustered gi|3221|emb|V01159.1| 5791 g61017 i0 95.427 7.27743902439024 328 15 100 0 1 328 2535 2862 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 2387 523 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;