RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA812001" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA812001 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7188627 7188627 PRJNA812001_P_NODE_17926_length_393_cov_4.303125_g17680_i0 PRJNA812001 17926 393 4.303125 16.91128125 Calcarisporiella thermophila 911321 Fungi Fungi 309 2.02e-79   NTclustered gi|2837864578|ref|XM_069394256.1| 911321 g17680 i0 82.72 89.7251908396947 353 55 89 6 44 393 1 350 Calcarisporiella thermophila 60S ribosomal protein uL16 (VTP21DRAFT_3904), partial mRNA blastn 35262 309 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
12289929 12289929 PRJNA812001_P_NODE_35110_length_321_cov_6.733871_g34864_i0 PRJNA812001 35110 321 6.733871 21.61572591 Radiomyces spectabilis 64574 Fungi Fungi 89.8 2.3e-13   NTclustered gi|2323729492|ref|XM_051563095.1| 64574 g34864 i0 79.389 0.40809968847352 131 23 40 4 187 316 743 616 Radiomyces spectabilis 60S ribosomal protein L18ae (BYT42DRAFT_336399), mRNA blastn 131 89.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
16112838 16112838 PRJNA812001_P_NODE_137713_length_210_cov_4.795620_g137467_i0 PRJNA812001 137713 210 4.79562 10.070802 Phycomyces blakesleeanus 4837 Fungi Fungi 54.7 0.005   NTclustered gi|1069946198|ref|XM_018438289.1| 763407 g137467 i0 92.308 0.185714285714286 39 1 18 2 136 172 667 629 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 39 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
22487752 22487752 PRJNA812001_P_NODE_70118_length_261_cov_4.484043_g69872_i0 PRJNA812001 70118 261 4.484043 11.70335223 Gamsiella multidivaricata 101098 Fungi Fungi 54.7 0.007   NTclustered gi|2323791363|ref|XM_051556536.1| 101098 g69872 i0 90.244 0.157088122605364 41 4 16 0 16 56 524 564 Gamsiella multidivaricata ribosomal protein L23/L15e core domain-containing protein (BC939DRAFT_457942), mRNA blastn 41 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
25037140 25037140 PRJNA812001_P_NODE_45220_length_298_cov_5.648889_g44974_i0 PRJNA812001 45220 298 5.648889 16.83368922 Radiomyces spectabilis 64574 Fungi Fungi 154 7.38e-33   NTclustered gi|2323709042|ref|XM_051563602.1| 64574 g44974 i0 88.372 2.81879194630872 129 13 43 2 130 257 128 1 Radiomyces spectabilis ribosomal L29e protein family-domain-containing protein (BYT42DRAFT_475122), partial mRNA blastn 840 154 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;