RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA812001" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA812001 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2086041 2086041 PRJNA812001_P_NODE_135702_length_238_cov_9.242424_g135456_i0 PRJNA812001 135702 238 9.242424 21.99696912 Phalansterium sp. PJK-2012 1267188 Evosea other_Eukaryota 89.8 1.63e-13   NTclustered gi|429125732|gb|KC121006.1| 1267188 g135456 i0 98.039 2.28991596638655 51 1 21 0 23 73 916 966 Phalansterium sp. PJK-2012 mitochondrion, complete genome blastn 545 89.8 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium sp. PJK-2012
2086108 2086108 PRJNA812001_P_NODE_16762_length_402_cov_44.927052_g16516_i0 PRJNA812001 16762 402 44.927052 180.60674904 uncultured Variosea 2777566 Evosea other_Eukaryota 222 2.78e-53   NTclustered gi|2006880850|emb|HG995806.1| 2777566 g16516 i0 78.706 35.7363184079602 371 52 89 20 47 402 602 960 uncultured Variosea genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, clone 62615b63 blastn 14366 222 1 Eukaryota Amoebozoa   Evosea Variosea       uncultured Variosea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;