RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA812001" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA812001 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13563989 13563989 PRJNA812001_P_NODE_137991_length_199_cov_24.555556_g137745_i0 PRJNA812001 137991 199 24.555556 48.86555644 Acidobacteriota bacterium 1978231 Bacteria Bacteria 171 4.57e-38   NTclustered gi|2621706021|emb|OY764083.1| 1978231 g137745 i0 94.545 56.8994974874372 110 6 55 0 23 132 662604 662713 MAG: Acidobacteriota bacterium isolate 715e7d27-e149-44c2-9d7f-aa5f8d263fc4 genome assembly, chromosome: 1 blastn 11323 171 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
16112879 16112879 PRJNA812001_P_NODE_16333_length_406_cov_1.750751_g16087_i0 PRJNA812001 16333 406 1.750751 7.10804906 Edaphobacter flagellatus 1933044 Bacteria Bacteria 726 0   NTclustered gi|2304905232|gb|CP073697.1| 1933044 g16087 i0 99.499 2.76600985221675 399 2 98 0 1 399 2488918 2489316 Edaphobacter flagellatus strain HZ411 chromosome, complete genome blastn 1123 726 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter flagellatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;