RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA812001" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 4 ✖

bioproject 1

  • PRJNA812001 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3361782 3361782 PRJNA812001_P_NODE_6463_length_609_cov_5.061567_g6219_i0 PRJNA812001 6463 609 5.061567 30.82494303 Natronomonas moolapensis 416273 Archaea Archaea 656 0   NTclustered gi|452081962|emb|HF582854.1| 268739 g6219 i0 87.5 81.2676518883415 568 71 93 0 19 586 566269 565702 Natronomonas moolapensis 8.8.11 complete genome blastn 49492 656 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas moolapensis
4638797 4638797 PRJNA812001_P_NODE_136024_length_236_cov_2.153374_g135778_i0 PRJNA812001 136024 236 2.153374 5.08196264 Salinirarus marinus 3068310 Archaea Archaea 350 6.700000000000001e-92   NTclustered gi|2563036161|gb|CP132293.1| 3068310 g135778 i0 98.974 95.0381355932203 195 2 100 0 1 195 71627 71821 Haloferacaceae archaeon XH8 plasmid unnamed, complete sequence blastn 22429 350 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Salinirarus Salinirarus marinus
4639329 4639329 PRJNA812001_P_NODE_5844_length_641_cov_11.957746_g5606_i0 PRJNA812001 5844 641 11.957746 76.64915186 Halorussus vallis 2953749 Archaea Archaea 56.5 0.005   NTclustered gi|2263966384|gb|CP100000.1| 2953749 g5606 i0 100 0.046801872074883 30 0 5 0 286 315 568345 568316 Halorussus vallis strain XZYJT10 chromosome, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus Halorussus vallis
17389326 17389326 PRJNA812001_P_NODE_75694_length_254_cov_1.690608_g75448_i0 PRJNA812001 75694 254 1.6906080000000001 4.29414432 Halobaculum marinum 3031996 Archaea Archaea 54.7 0.006   NTclustered gi|2463608140|gb|CP119989.1| 3031996 g75448 i0 100 0.114173228346457 29 0 11 0 161 189 649793 649821 Halobaculum marinum strain DT55 chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum marinum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;