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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA812001" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 16 ✖

bioproject 1

  • PRJNA812001 · 16 ✖

analysis 1

  • blastn · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2086780 2086780 PRJNA812001_P_NODE_9682_length_503_cov_5.000000_g9436_i0 PRJNA812001 9682 503 5 25.15 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.049   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g9436 i0 100 0.0556660039761431 28 0 6 0 476 503 40 13 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
4639146 4639146 PRJNA812001_P_NODE_3824_length_785_cov_15.043539_g3602_i0 PRJNA812001 3824 785 15.043539 118.09178115 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.022   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g3602 i0 100 0.0369426751592357 29 0 4 0 757 785 38 10 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
5913645 5913645 PRJNA812001_P_NODE_11845_length_460_cov_14.976744_g11599_i0 PRJNA812001 11845 460 14.976744 68.8930224 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.045   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g11599 i0 92.105 0.0826086956521739 38 2 8 1 1 37 14 51 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 38 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
5914132 5914132 PRJNA812001_P_NODE_45085_length_299_cov_1.163717_g44839_i0 PRJNA812001 45085 299 1.163717 3.47951383 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 403 6.66e-108   NTclustered gi|300676750|gb|GQ377668.1| 45107 g44839 i0 90.97 99.6789297658863 299 27 100 0 1 299 1022 724 Heteromita globosa actin gene, partial cds blastn 29804 403 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
6328557 6328557 PRJNA812001_P_NODE_87905_length_249_cov_8.181818_g87659_i0 PRJNA812001 87905 249 8.181818 20.37272682 Achlyaceae 3456998 SAR_Eukaryotes SAR_Eukaryotes 412 8.97e-111   NTclustered gi|6740078|gb|AF218191.1|AF218191 4767 g87659 i0 98.712 92.1887550200803 233 2 93 1 1 232 292 60 Achlya klebsiana large subunit ribosomal RNA gene, partial sequence blastn 22955 412 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya klebsiana
7188467 7188467 PRJNA812001_P_NODE_11906_length_459_cov_8.844560_g11660_i0 PRJNA812001 11906 459 8.84456 40.5965304 Coscinodiscus granii 265552 SAR_Eukaryotes SAR_Eukaryotes 167 1.52e-36   NTclustered gi|2192941198|ref|NC_060315.1| 265552 g11660 i0 79.098 36.1525054466231 244 50 53 1 25 267 28278 28521 Coscinodiscus granii mitochondrion, complete sequence blastn 16594 167 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Coscinodiscales Coscinodiscaceae Coscinodiscus Coscinodiscus granii
9738591 9738591 PRJNA812001_P_NODE_23708_length_359_cov_3.664336_g23462_i0 PRJNA812001 23708 359 3.664336 13.15496624 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 298 3.96e-76   NTclustered gi|301014702|gb|GQ377715.1| 323453 g23462 i0 90.95 5.6991643454039 221 20 62 0 115 335 485 265 Heteromita sp. PRA-74 ribosomal protein S23a (rps23a) mRNA, complete cds blastn 2046 298 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
11014369 11014369 PRJNA812001_P_NODE_19049_length_385_cov_3.275641_g18803_i0 PRJNA812001 19049 385 3.275641 12.61121785 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.01   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g18803 i0 100 0.148051948051948 29 0 8 0 357 385 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
12289813 12289813 PRJNA812001_P_NODE_2370_length_978_cov_23.401105_g2177_i0 PRJNA812001 2370 978 23.401105 228.8628069 Bacterosira constricta 1792275 SAR_Eukaryotes SAR_Eukaryotes 180 4.36e-40   NTclustered gi|2862228847|gb|PQ645481.1| 1792275 g2177 i0 77.961 16.1543967280164 304 56 51 8 681 978 3594 3296 Bacterosira constricta isolate AGSB0311 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15799 180 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Bacterosira Bacterosira constricta
13564125 13564125 PRJNA812001_P_NODE_21871_length_368_cov_4.898305_g21625_i0 PRJNA812001 21871 368 4.898305 18.0257624 Stenophora draconis 2977109 SAR_Eukaryotes SAR_Eukaryotes 187 9.179999999999997e-43   NTclustered gi|2295827472|gb|OP390087.1| 2977109 g21625 i0 86.982 63.4157608695652 169 19 45 2 1 167 5027 5194 Stenophora sp. TMiroliubova-2022b isolate T35 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23337 187 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Stenophoridae Stenophora Stenophora draconis
13564170 13564170 PRJNA812001_P_NODE_25771_length_350_cov_9.678700_g25525_i0 PRJNA812001 25771 350 9.6787 33.87545 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.033   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g25525 i0 100 0.08 28 0 8 0 1 28 11 38 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
14839209 14839209 PRJNA812001_P_NODE_8912_length_523_cov_5.640000_g8666_i0 PRJNA812001 8912 523 5.64 29.4972 Pseudovorticella sp. FG-2015 1607895 SAR_Eukaryotes SAR_Eukaryotes 917 0   NTclustered gi|759083559|gb|KM222176.1| 1607895 g8666 i0 98.279 94.6137667304015 523 9 100 0 1 523 824 302 Pseudovorticella sp. FG-2015 voucher SZ2010032108 large subunit ribosomal RNA gene, partial sequence blastn 49483 917 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Pseudovorticella Pseudovorticella sp. FG-2015
16112904 16112904 PRJNA812001_P_NODE_17893_length_394_cov_0.947040_g17647_i0 PRJNA812001 17893 394 0.94704 3.7313376 Proschkinia sp. SZCZR1824 2588390 SAR_Eukaryotes SAR_Eukaryotes 80.5 1.73e-10   NTclustered gi|1681061561|gb|MH800316.1| 2588390 g17647 i0 76.433 1.76395939086294 157 31 39 6 225 379 4566 4414 Proschkinia sp. SZCZR1824 mitochondrion, complete genome blastn 695 80.5 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Proschkiniaceae Proschkinia Proschkinia sp. SZCZR1824
16113262 16113262 PRJNA812001_P_NODE_48833_length_291_cov_1.412844_g48587_i0 PRJNA812001 48833 291 1.412844 4.11137604 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g48587 i0 96.875 0.494845360824742 32 1 11 0 1 32 10 41 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 144 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
20350819 20350819 PRJNA812001_P_NODE_65356_length_268_cov_1.215385_g65110_i0 PRJNA812001 65356 268 1.215385 3.2572318 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.27e-4   NTclustered gi|820702250|tpe|LN714502.1| 432359 g65110 i0 100 0.23134328358209 31 0 12 0 78 108 3278074 3278044 TPA_asm: Toxoplasma gondii VEG, chromosome chrXII, complete genome blastn 62 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
22487383 22487383 PRJNA812001_P_NODE_29178_length_338_cov_5.094340_g28932_i0 PRJNA812001 29178 338 5.09434 17.2188692 Hematodinium sp. 173654 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.009   NTclustered gi|357196844|emb|HE610736.1| 173654 g28932 i0 100 0.0857988165680473 29 0 9 0 1 29 4 32 Hematodinium sp. mitochondrial partial small subunit ribosomal RNA (ssu rRNA gene), clone 16 blastn 29 54.7 1 Eukaryota Sar     Dinophyceae Syndiniales Syndiniaceae Hematodinium Hematodinium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;