RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA811725" and tax_phylum = "Ctenophora"

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tax_superkingdom 1

tax_phylum 1

  • Ctenophora · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA811725 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2085696 2085696 PRJNA811725_P_NODE_30962_length_280_cov_1.792271_g30716_i0 PRJNA811725 30962 280 1.792271 5.0183588 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 63.9 1.19e-5   NTclustered gi|2700963672|ref|XM_063822308.1| 2820187 g30716 i0 97.297 0.242857142857143 37 1 13 0 29 65 1938 1974 PREDICTED: Bolinopsis microptera zinc finger and SCAN domain-containing protein 2-like (LOC134814232), transcript variant X2, mRNA blastn 68 63.9 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
7188255 7188255 PRJNA811725_P_NODE_34026_length_263_cov_24504.331579_g33780_i0 PRJNA811725 34026 263 24504.331579 64446.39205277 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 80.5 1.1e-10   NTclustered gi|2700963672|ref|XM_063822308.1| 2820187 g33780 i0 82.979 2.01520912547529 94 10 37 6 159 246 1974 1881 PREDICTED: Bolinopsis microptera zinc finger and SCAN domain-containing protein 2-like (LOC134814232), transcript variant X2, mRNA blastn 530 80.5 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
23762553 23762553 PRJNA811725_P_NODE_29439_length_286_cov_37676.704225_g29193_i0 PRJNA811725 29439 286 37676.704225 107755.3740835 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 80.5 1.21e-10   NTclustered gi|2700963672|ref|XM_063822308.1| 2820187 g29193 i0 82.979 1.85314685314685 94 10 34 6 182 269 1974 1881 PREDICTED: Bolinopsis microptera zinc finger and SCAN domain-containing protein 2-like (LOC134814232), transcript variant X2, mRNA blastn 530 80.5 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;