RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA811725" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 6 ✖

bioproject 1

  • PRJNA811725 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5913363 5913363 PRJNA811725_P_NODE_28245_length_291_cov_1.573394_g27999_i0 PRJNA811725 28245 291 1.573394 4.57857654 Meadowvirus AH04 3060193 Viruses Viruses 217 9.03e-52   NTclustered gi|2438095778|ref|NC_070952.1| 2869569 g27999 i0 84.071 2.02061855670103 226 34 77 2 67 291 242527 242303 Erwinia phage AH04, complete genome blastn 588 217 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Chimalliviridae Meadowvirus Meadowvirus AH04
13563620 13563620 PRJNA811725_P_NODE_32391_length_273_cov_1.540000_g32145_i0 PRJNA811725 32391 273 1.54 4.2042 Caudoviricetes sp. 2832643 Viruses Viruses 353 6.14e-93   NTclustered gi|2053058458|tpg|BK024596.1| 2832643 g32145 i0 90.11 57.2454212454212 273 26 100 1 1 273 5363 5092 MAG TPA_asm: Caudoviricetes sp. isolate ctaIB11, partial genome blastn 15628 353 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
13977894 13977894 PRJNA811725_P_NODE_32451_length_273_cov_1.210000_g32205_i0 PRJNA811725 32451 273 1.21 3.3033 Viruses 10239 Viruses Viruses 377 3.64e-100   NTclustered gi|2067460891|gb|MW677512.1| 2835969 g32205 i0 91.667 10.6263736263736 276 17 100 4 1 273 41822 41550 Rhodobacter phage RcFrancesLouise, complete genome blastn 2901 377 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Rhodobacter phage RcFrancesLouise
14838152 14838152 PRJNA811725_P_NODE_27152_length_296_cov_3.417040_g26906_i0 PRJNA811725 27152 296 3.41704 10.1144384 Caudoviricetes sp. 2832643 Viruses Viruses 143 1.59e-29   NTclustered gi|2914852300|gb|OR221708.1| 2832643 g26906 i0 95.506 2.61824324324324 89 4 49 0 133 221 27661 27573 MAG: Caudoviricetes sp. isolate MSP1326 genomic sequence blastn 775 143 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
19936669 19936669 PRJNA811725_P_NODE_30816_length_281_cov_1.269231_g30570_i0 PRJNA811725 30816 281 1.269231 3.56653911 Rhodobacter phage RcKvothe 2970517 Viruses Viruses 385 2.25e-102   NTclustered gi|2284663167|gb|OP009275.1| 2970517 g30570 i0 91.697 9.8576512455516 277 23 99 0 5 281 20077 19801 Rhodobacter phage RcKvothe, complete genome blastn 2770 385 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Rhodobacter phage RcKvothe
23762614 23762614 PRJNA811725_P_NODE_37199_length_249_cov_0.875000_g36953_i0 PRJNA811725 37199 249 0.875 2.17875 Caudoviricetes sp. 2832643 Viruses Viruses 270 5.72e-68   NTclustered gi|2056947620|tpg|BK022619.1| 2832643 g36953 i0 89.352 1.85542168674699 216 21 86 2 1 215 13677 13463 MAG TPA_asm: Caudoviricetes sp. isolate ctY7F3, partial genome blastn 462 270 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;