contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA811714" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1223643 | 1223643 | PRJNA811714_P_NODE_16601_length_260_cov_5.085561_g16408_i0 | PRJNA811714 | 16601 | 260 | 5.085561 | 13.2224586 | Deinococcus | 1298 | Bacteria | Bacteria | 446 | 9.3e-121 | NTclustered | gi|2706837832|gb|CP149782.1| | 3112952 | g16408 | i0 | 97.683 | 429.857692307692 | 259 | 6 | 99 | 0 | 2 | 260 | 1454272 | 1454530 | Deinococcus sp. VB142 chromosome 1, complete sequence | blastn | 111763 | 446 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. VB142 | ||
| 3360657 | 3360657 | PRJNA811714_P_NODE_7703_length_338_cov_6.803774_g7510_i0 | PRJNA811714 | 7703 | 338 | 6.803774 | 22.99675612 | Deinococcus ficus | 317577 | Bacteria | Bacteria | 603 | 7.019999999999999e-168 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g7510 | i0 | 98.817 | 254.198224852071 | 338 | 4 | 100 | 0 | 1 | 338 | 2342003 | 2342340 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 85919 | 603 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 6327694 | 6327694 | PRJNA811714_P_NODE_26045_length_229_cov_26.211538_g25852_i0 | PRJNA811714 | 26045 | 229 | 26.211538 | 60.02442202 | Deinococcus | 1298 | Bacteria | Bacteria | 418 | 1.7499999999999995e-112 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g25852 | i0 | 99.563 | 214.655021834061 | 229 | 1 | 100 | 0 | 1 | 229 | 1792454 | 1792226 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 49156 | 418 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 8462483 | 8462483 | PRJNA811714_P_NODE_2787_length_510_cov_7.551487_g2605_i0 | PRJNA811714 | 2787 | 510 | 7.551487 | 38.5125837 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 649 | 0 | NTclustered | gi|2108366028|gb|CP070651.1| | 2026798 | g2605 | i0 | 90.909 | 86.8745098039216 | 484 | 42 | 95 | 2 | 2 | 484 | 8220 | 7738 | MAG: Trueperaceae bacterium isolate bin86 chromosome | blastn | 44306 | 649 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 10152225 | 10152225 | PRJNA811714_P_NODE_21668_length_241_cov_13.875000_g21475_i0 | PRJNA811714 | 21668 | 241 | 13.875 | 33.43875 | Deinococcus | 1298 | Bacteria | Bacteria | 446 | 8.519999999999999e-121 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g21475 | i0 | 100 | 211.647302904564 | 241 | 0 | 100 | 0 | 1 | 241 | 1793402 | 1793642 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 51007 | 446 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 11427536 | 11427536 | PRJNA811714_P_NODE_7169_length_347_cov_5.463504_g6978_i0 | PRJNA811714 | 7169 | 347 | 5.463504 | 18.95835888 | Truepera | 332248 | Bacteria | Bacteria | 392 | 1.6999999999999995e-104 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g6978 | i0 | 87.069 | 293.688760806916 | 348 | 43 | 100 | 2 | 1 | 347 | 417 | 71 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 101910 | 392 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 19075328 | 19075328 | PRJNA811714_P_NODE_26355_length_229_cov_2.961538_g26162_i0 | PRJNA811714 | 26355 | 229 | 2.961538 | 6.78192202 | Deinococcus | 1298 | Bacteria | Bacteria | 418 | 1.7499999999999995e-112 | NTclustered | gi|145033|gb|M21413.1|DEIRGDA | 1299 | g26162 | i0 | 99.563 | 135.676855895196 | 229 | 1 | 100 | 0 | 1 | 229 | 28 | 256 | D.radiodurans 16S ribosomal RNA gene | blastn | 31070 | 418 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 19075356 | 19075356 | PRJNA811714_P_NODE_5175_length_394_cov_5.495327_g4985_i0 | PRJNA811714 | 5175 | 394 | 5.495327 | 21.65158838 | Truepera | 332248 | Bacteria | Bacteria | 590 | 6.459999999999999e-164 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g4985 | i0 | 93.655 | 553.48730964467 | 394 | 25 | 100 | 0 | 1 | 394 | 777 | 1170 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 218074 | 595 | 0.991596638655462 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 21211588 | 21211588 | PRJNA811714_P_NODE_25917_length_230_cov_2.942675_g25724_i0 | PRJNA811714 | 25917 | 230 | 2.942675 | 6.7681525 | Deinococcus grandis | 57498 | Bacteria | Bacteria | 254 | 5.24e-63 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g25724 | i0 | 86.842 | 21.4652173913043 | 228 | 28 | 99 | 2 | 2 | 228 | 1095158 | 1095384 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 4937 | 254 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;