contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA811237" and tax_superkingdom = "Viruses"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 808795 | 808795 | PRJNA811237_S_NODE_34101_length_162_cov_0.902655_g33861_i0 | PRJNA811237 | 34101 | 162 | 0.902655 | 1.4623011 | Lentivirus simimdef | 3418654 | Viruses | Viruses | 65.8 | 1.73e-6 | NTclustered | gi|331687935|gb|JF741333.1| | 11723 | g33861 | i0 | 95.122 | 3.42592592592593 | 41 | 2 | 25 | 0 | 1 | 41 | 324 | 284 | Simian immunodeficiency virus isolate SIVmac251_1991SIV4_C01 envelope glycoprotein-like (env) gene, partial sequence | blastn | 555 | 65.8 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus simimdef | ||
| 14837048 | 14837048 | PRJNA811237_S_NODE_4432_length_344_cov_2.294915_g4192_i0 | PRJNA811237 | 4432 | 344 | 2.294915 | 7.8945076 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 62.1 | 5.41e-5 | NTclustered | gi|407734945|gb|JX447155.1| | 11676 | g4192 | i0 | 95 | 0.232558139534884 | 40 | 0 | 12 | 2 | 187 | 226 | 4394 | 4357 | HIV-1 isolate AA039a03R from Thailand pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds | blastn | 80 | 62.1 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 14837050 | 14837050 | PRJNA811237_S_NODE_4512_length_340_cov_2.749141_g4272_i0 | PRJNA811237 | 4512 | 340 | 2.749141 | 9.3470794 | Caudoviricetes sp. | 2832643 | Viruses | Viruses | 58.4 | 6.9e-4 | NTclustered | gi|2052168031|tpg|BK032975.1| | 2832643 | g4272 | i0 | 97.059 | 0.194117647058824 | 34 | 1 | 10 | 0 | 93 | 126 | 12793 | 12760 | MAG TPA_asm: Caudoviricetes sp. isolate ctSSP12, partial genome | blastn | 66 | 58.4 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes sp. | |||||
| 22485692 | 22485692 | PRJNA811237_S_NODE_35198_length_161_cov_0.910714_g34958_i0 | PRJNA811237 | 35198 | 161 | 0.910714 | 1.46624954 | Bridgettevirus constance | 2734223 | Viruses | Viruses | 54.7 | 0.004 | NTclustered | gi|1842028270|ref|NC_048092.1| | 2419950 | g34958 | i0 | 92.105 | 0.236024844720497 | 38 | 3 | 24 | 0 | 58 | 95 | 35030 | 34993 | Arthrobacter phage Constance, complete genome | blastn | 38 | 54.7 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Bridgettevirus | Bridgettevirus constance | ||||
| 25450213 | 25450213 | PRJNA811237_S_NODE_27940_length_167_cov_0.864407_g27700_i0 | PRJNA811237 | 27940 | 167 | 0.864407 | 1.44355969 | root | 1 | Root_unresolved | Root_unresolved | 309 | 7.53e-80 | NTclustered | gi|2915048543|gb|OR222821.1| | 2832643 | g27700 | i0 | 100 | 2.98802395209581 | 167 | 0 | 100 | 0 | 1 | 167 | 54676 | 54842 | MAG: Caudoviricetes sp. isolate MSP0536 genomic sequence | blastn | 499 | 309 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;