RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA811237" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA811237 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
808802 808802 PRJNA811237_S_NODE_3981_length_364_cov_1.368254_g3741_i0 PRJNA811237 3981 364 1.368254 4.98044456 Linderina pennispora 61395 Fungi Fungi 73.1 2.65e-8   NTclustered gi|2028325148|ref|XM_040885153.1| 61395 g3741 i0 97.619 1.33516483516484 42 1 12 0 316 357 1783 1742 Linderina pennispora polyadenylate binding protein (DL89DRAFT_248929), partial mRNA blastn 486 73.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
8461881 8461881 PRJNA811237_S_NODE_6227_length_295_cov_3.934959_g5987_i0 PRJNA811237 6227 295 3.934959 11.60812905 Linderina pennispora 61395 Fungi Fungi 156 2.03e-33   NTclustered gi|2028313130|ref|XM_040891190.1| 61395 g5987 i0 83.14 16.3796610169492 172 27 58 2 125 295 789 619 Linderina pennispora uncharacterized protein (DL89DRAFT_320180), partial mRNA blastn 4832 156 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;