RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA811237" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA811237 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7187045 7187045 PRJNA811237_S_NODE_19486_length_191_cov_1.436620_g19246_i0 PRJNA811237 19486 191 1.43662 2.7439442 Brachionus plicatilis 10195 Rotifera other_Eukaryota 135 1.59e-27   NTclustered gi|22506756|gb|AF486264.1| 10195 g19246 i0 80.328 24.1884816753927 183 32 95 4 11 191 260 80 Brachionus plicatilis myosin heavy chain type II mRNA, partial cds blastn 4620 135 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
11012766 11012766 PRJNA811237_S_NODE_8469_length_259_cov_2.280952_g8229_i0 PRJNA811237 8469 259 2.280952 5.90766568 Lecane inermis 1471631 Rotifera other_Eukaryota 388 1.58e-103   NTclustered gi|1886078471|gb|MT852959.1| 1471631 g8229 i0 94.4 94.019305019305 250 14 97 0 9 258 1 250 Lecane inermis isolate Poland_culture cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 24351 388 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane inermis
12288107 12288107 PRJNA811237_S_NODE_1970_length_512_cov_3.695464_g1731_i0 PRJNA811237 1970 512 3.695464 18.92077568 Brachionus rubens 392764 Rotifera other_Eukaryota 372 3.39e-98   NTclustered gi|632795126|gb|KJ489417.1| 392764 g1731 i0 81.237 37.841796875 469 80 91 8 1 465 576 112 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 19375 372 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
13562368 13562368 PRJNA811237_S_NODE_1911_length_520_cov_2.577495_g1672_i0 PRJNA811237 1911 520 2.577495 13.402974 Asplanchna brightwellii 2005548 Rotifera other_Eukaryota 215 6.14e-51   NTclustered gi|2899343712|gb|PQ788833.1| 2005548 g1672 i0 78.834 23.5730769230769 326 63 62 5 3 325 547 869 Asplanchna brightwellii chromosome I mitochondrion, complete sequence blastn 12258 215 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna brightwellii
16111225 16111225 PRJNA811237_S_NODE_21933_length_183_cov_0.970149_g21693_i0 PRJNA811237 21933 183 0.970149 1.77537267 Adineta ricciae 249248 Rotifera other_Eukaryota 327 2.31e-85   NTclustered gi|62362195|gb|AY942837.1| 249248 g21693 i0 98.907 1 183 2 100 0 1 183 275 457 Adineta ricciae ribosomal protein S7-like protein mRNA, complete cds blastn 183 327 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
22485643 22485643 PRJNA811237_S_NODE_1718_length_551_cov_13.061753_g1479_i0 PRJNA811237 1718 551 13.061753 71.97025903 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 215 6.54e-51   NTclustered gi|1800329609|gb|MN417951.1| 104777 g1479 i0 77.368 5.06170598911071 380 74 68 11 178 551 9835 10208 Brachionus calyciflorus chromosome I mitochondrion, complete sequence blastn 2789 215 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
22485704 22485704 PRJNA811237_S_NODE_4278_length_351_cov_1.486755_g4038_i0 PRJNA811237 4278 351 1.486755 5.21851005 Philodina citrina 468664 Rotifera other_Eukaryota 372 2.24e-98   NTclustered gi|407227484|emb|FR856884.1| 468664 g4038 i0 91.273 53.0826210826211 275 20 78 4 79 351 1881 2153 Philodina citrina complete mitochondrial genome blastn 18632 372 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
25035253 25035253 PRJNA811237_S_NODE_25480_length_172_cov_1.243902_g25240_i0 PRJNA811237 25480 172 1.243902 2.13951144 Bdelloidea environmental sample 317506 Rotifera other_Eukaryota 259 7.92e-65   NTclustered gi|157365406|gb|EF650563.1| 317506 g25240 i0 94.152 98.2732558139535 171 9 99 1 1 171 316 485 Uncultured bdelloid rotifer isolate Undet.TZ.1 cytochrome oxidase subunit I gene, partial cds; mitochondrial blastn 16903 259 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria       Bdelloidea environmental sample

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;