RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA811237" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA811237 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2084463 2084463 PRJNA811237_S_NODE_14462_length_212_cov_2.503067_g14222_i0 PRJNA811237 14462 212 2.503067 5.30650204 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 342 9.879999999999999e-90   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g14222 i0 95.775 3.00471698113208 213 8 100 1 1 212 3704 3916 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 637 342 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
8461844 8461844 PRJNA811237_S_NODE_26847_length_168_cov_1.705882_g26607_i0 PRJNA811237 26847 168 1.705882 2.86588176 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 159 8.08e-35   NTclustered gi|2124403222|ref|XM_044685950.1| 51637 g26607 i0 85.526 5.31547619047619 152 22 90 0 17 168 650 499 Naegleria lovaniensis uncharacterized protein (C9374_010409), partial mRNA blastn 893 159 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
9736815 9736815 PRJNA811237_S_NODE_10728_length_236_cov_2.502674_g10488_i0 PRJNA811237 10728 236 2.502674 5.90631064 Percolomonas cosmopolitus 63605 Heterolobosea other_Eukaryota 289 1.48e-73   NTclustered gi|33089879|gb|AY283748.1| 63605 g10488 i0 89.474 99.2881355932203 228 24 97 0 9 236 493 266 Percolomonas cosmopolitus isolate Gym67_1 actin gene, partial cds blastn 23432 289 1 Eukaryota Discoba   Heterolobosea     Percolomonadidae Percolomonas Percolomonas cosmopolitus
11012734 11012734 PRJNA811237_S_NODE_36409_length_155_cov_2.613208_g36169_i0 PRJNA811237 36409 155 2.613208 4.0504724 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 73.1 9.78e-9   NTclustered gi|2119438032|ref|XM_044694250.1| 51637 g36169 i0 92.157 1.23225806451613 51 4 33 0 68 118 480 430 Naegleria lovaniensis uncharacterized protein (C9374_004594), partial mRNA blastn 191 73.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
17387171 17387171 PRJNA811237_S_NODE_33654_length_162_cov_1.327434_g33414_i0 PRJNA811237 33654 162 1.327434 2.15044308 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 128 2.18e-25   NTclustered gi|2119420720|ref|XM_044689986.1| 51637 g33414 i0 80.864 95.4074074074074 162 31 100 0 1 162 899 1060 Naegleria lovaniensis uncharacterized protein (C9374_014042), partial mRNA blastn 15456 128 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
19075233 19075233 PRJNA811237_S_NODE_31335_length_164_cov_0.886957_g31095_i0 PRJNA811237 31335 164 0.886957 1.45460948 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 302 1.23e-77   NTclustered gi|89148133|gb|DQ388519.1| 373143 g31095 i0 100 25.6524390243902 163 0 99 0 2 164 306 468 Heterolobosea sp. BA 16S small subunit ribosomal RNA gene, partial sequence; and His-Cys box homing endonuclease gene, complete cds blastn 4207 303 0.996699669966997 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. BA
19935411 19935411 PRJNA811237_S_NODE_17356_length_199_cov_2.313333_g17116_i0 PRJNA811237 17356 199 2.313333 4.60353267 Acrasis rosea 43695 Heterolobosea other_Eukaryota 204 4.51e-48   NTclustered gi|12083876|gb|AF190771.1|AF190771 43695 g17116 i0 86.813 69.5628140703518 182 24 91 0 1 182 579 760 Acrasis rosea elongation factor 1 alpha (tef1) gene, partial cds blastn 13843 204 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis rosea
23761383 23761383 PRJNA811237_S_NODE_30499_length_165_cov_0.879310_g30259_i0 PRJNA811237 30499 165 0.87931 1.4508615 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 300 4.46e-77   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g30259 i0 99.394 53.9939393939394 165 1 100 0 1 165 2662 2826 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8909 300 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;