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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA811237" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 22 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA811237 · 22 ✖

analysis 1

  • blastn · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
808800 808800 PRJNA811237_S_NODE_3681_length_377_cov_5.064024_g3441_i0 PRJNA811237 3681 377 5.064024 19.09137048 Micromonas commoda 296587 Plants Plants 344 5.29e-90   NTclustered gi|255078509|ref|XM_002502789.1| 296587 g3441 i0 83.158 82.2122015915119 380 61 100 3 1 377 778 399 Micromonas commoda predicted protein mRNA blastn 30994 344 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
3359718 3359718 PRJNA811237_S_NODE_23183_length_179_cov_1.115385_g22943_i0 PRJNA811237 23183 179 1.115385 1.99653915 Ostreococcus tauri 70448 Plants Plants 132 1.89e-26   NTclustered gi|308802362|ref|XM_003078447.1| 70448 g22943 i0 86.066 8.36312849162011 122 17 68 0 51 172 560 439 Ostreococcus tauri Succinyl-CoA synthetase-like (OT_ostta03g05920), partial mRNA blastn 1497 132 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Ostreococcus Ostreococcus tauri
3359763 3359763 PRJNA811237_S_NODE_4563_length_338_cov_2.982699_g4323_i0 PRJNA811237 4563 338 2.982699 10.08152262 Volvox carteri 3067 Plants Plants 134 1.11e-26   NTclustered gi|302853854|ref|XM_002958394.1| 3068 g4323 i0 82.781 37.2958579881657 151 24 44 2 12 161 243 392 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_77934), mRNA blastn 12606 134 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
6327586 6327586 PRJNA811237_S_NODE_5525_length_310_cov_4.065134_g5285_i0 PRJNA811237 5525 310 4.065134 12.6019154 Eukaryota 2759 Plants Plants 134 1.01e-26   NTclustered gi|926782661|ref|XM_014044351.1| 145388 g5285 i0 77.311 6.85161290322581 238 46 75 8 1 234 294 61 Monoraphidium neglectum 40S ribosomal protein S15 mRNA blastn 2124 134 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
7601673 7601673 PRJNA811237_S_NODE_23246_length_178_cov_3.790698_g23006_i0 PRJNA811237 23246 178 3.790698 6.74744244 Eukaryota 2759 Plants Plants 80.5 6.91e-11   NTclustered gi|66864277|gb|DQ015732.1| 57475 g23006 i0 94.34 32.5561797752809 53 1 29 2 1 52 588 537 Chlamydomonas pulsatilla strain UTEX 410 26S ribosomal RNA gene, partial sequence blastn 5795 80.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas pulsatilla
9736847 9736847 PRJNA811237_S_NODE_1968_length_512_cov_7.788337_g1729_i0 PRJNA811237 1968 512 7.788337 39.87628544 Chlorella variabilis 554065 Plants Plants 300 1.62e-76   NTclustered gi|552840730|ref|XM_005850063.1| 554065 g1729 i0 79.398 49.998046875 432 83 84 5 42 470 489 61 Chlorella variabilis 40S ribosomal protein S18 (CHLNCDRAFT_34417) mRNA, complete cds blastn 25599 300 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
9736858 9736858 PRJNA811237_S_NODE_22148_length_182_cov_1.195489_g21908_i0 PRJNA811237 22148 182 1.195489 2.17578998 Chlamydomonas reinhardtii 3055 Plants Plants 130 6.95e-26   NTclustered gi|2082247499|ref|XM_043062974.1| 3055 g21908 i0 79.775 21.7252747252747 178 36 98 0 3 180 1170 1347 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g273300v5), mRNA blastn 3954 130 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
9736896 9736896 PRJNA811237_S_NODE_32008_length_164_cov_0.869565_g31768_i0 PRJNA811237 32008 164 0.869565 1.4260866 Mantoniella tinhauana 3097027 Plants Plants 65.8 1.76e-6   NTclustered gi|2735153292|gb|CP140077.1| 3097027 g31768 i0 97.368 0.975609756097561 38 1 23 0 5 42 318524 318561 Mantoniella tinhauana isolate LFS chromosome 16 blastn 160 65.8 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Mantoniella Mantoniella tinhauana
12288166 12288166 PRJNA811237_S_NODE_5690_length_307_cov_1.410853_g5450_i0 PRJNA811237 5690 307 1.410853 4.33131871 Chlamydomonas reinhardtii 3055 Plants Plants 176 1.63e-39   NTclustered gi|2082236323|ref|XM_001689445.2| 3055 g5450 i0 78.092 24.4234527687296 283 58 92 4 27 307 512 232 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g019250v5), mRNA blastn 7498 176 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
14836985 14836985 PRJNA811237_S_NODE_19372_length_192_cov_0.874126_g19132_i0 PRJNA811237 19372 192 0.874126 1.67832192 Micromonas commoda 296587 Plants Plants 71.3 4.56e-8   NTclustered gi|255072042|ref|XM_002499650.1| 296587 g19132 i0 95.455 0.229166666666667 44 2 23 0 70 113 2412 2369 Micromonas commoda kinesin motor domain partial mRNA blastn 44 71.3 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
16526371 16526371 PRJNA811237_S_NODE_23293_length_178_cov_2.170543_g23053_i0 PRJNA811237 23293 178 2.170543 3.86356654 Eukaryota 2759 Plants Plants 152 1.4399999999999999e-32   NTclustered gi|1569651898|gb|MH328236.1| 1191503 g23053 i0 82.659 29.9494382022472 173 28 97 2 5 176 233 62 Ettlia sp. YC001 heat shock protein hsp90A (Hsp90A) mRNA, complete cds blastn 5331 152 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Ettlia Ettlia sp. YC001
18660270 18660270 PRJNA811237_S_NODE_5095_length_322_cov_1.333333_g4855_i0 PRJNA811237 5095 322 1.333333 4.29333226 Mantoniella tinhauana 3097027 Plants Plants 169 2.8799999999999996e-37   NTclustered gi|2735153286|gb|CP140071.1| 3097027 g4855 i0 81.731 21.4254658385093 208 32 64 6 118 322 1405227 1405431 Mantoniella tinhauana isolate LFS chromosome 10 blastn 6899 169 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Mantoniella Mantoniella tinhauana
19935481 19935481 PRJNA811237_S_NODE_4736_length_332_cov_2.035336_g4496_i0 PRJNA811237 4736 332 2.035336 6.75731552 Chlamydomonas reinhardtii 3055 Plants Plants 193 1.77e-44   NTclustered gi|2082238142|ref|XM_043059158.1| 3055 g4496 i0 81.513 5.60843373493976 238 40 71 4 2 237 1231 1466 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g076350v5), mRNA blastn 1862 193 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
19935492 19935492 PRJNA811237_S_NODE_5976_length_301_cov_1.103175_g5736_i0 PRJNA811237 5976 301 1.103175 3.32055675 Auxenochlorella protothecoides 3075 Plants Plants 167 9.59e-37   NTclustered gi|760447584|ref|XM_011402559.1| 3075 g5736 i0 79.012 1.49169435215947 243 51 81 0 40 282 768 1010 Auxenochlorella protothecoides Phosphate carrier protein, mitochondrial partial mRNA blastn 449 167 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
19935507 19935507 PRJNA811237_S_NODE_9756_length_245_cov_2.530612_g9516_i0 PRJNA811237 9756 245 2.530612 6.1999994 Chlorella variabilis 554065 Plants Plants 222 1.59e-53   NTclustered gi|552830805|ref|XM_005847928.1| 554065 g9516 i0 83.607 5.91020408163265 244 33 98 5 7 245 643 402 Chlorella variabilis hypothetical protein (RACK1) mRNA, complete cds blastn 1448 222 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
21210958 21210958 PRJNA811237_S_NODE_14237_length_213_cov_5.658537_g13997_i0 PRJNA811237 14237 213 5.658537 12.05268381 Micromonas commoda 296587 Plants Plants 183 6.369999999999998e-42   NTclustered gi|255072468|ref|XM_002499863.1| 296587 g13997 i0 87.117 26.1408450704225 163 19 76 2 43 204 190 29 Micromonas commoda predicted protein mRNA blastn 5568 183 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
21210986 21210986 PRJNA811237_S_NODE_21077_length_185_cov_5.860294_g20837_i0 PRJNA811237 21077 185 5.860294 10.8415439 Chlamydomonas reinhardtii 3055 Plants Plants 189 1.15e-43   NTclustered gi|2082258180|ref|XM_043067316.1| 3055 g20837 i0 91.852 123.027027027027 135 11 73 0 47 181 1868 1734 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_11g467567v5), mRNA blastn 22760 189 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
21625626 21625626 PRJNA811237_S_NODE_31597_length_164_cov_0.886957_g31357_i0 PRJNA811237 31597 164 0.886957 1.45460948 Eukaryota 2759 Plants Plants 56.5 0.001   NTclustered gi|926780023|ref|XM_014043032.1| 145388 g31357 i0 100 2.31707317073171 30 0 18 0 131 160 635 606 Monoraphidium neglectum hypothetical protein mRNA blastn 380 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
23761364 23761364 PRJNA811237_S_NODE_25319_length_172_cov_2.902439_g25079_i0 PRJNA811237 25319 172 2.902439 4.99219508 Monoraphidium neglectum 145388 Plants Plants 97.1 6.57e-16   NTclustered gi|926782011|ref|XM_014044026.1| 145388 g25079 i0 95.082 18.4476744186047 61 3 35 0 112 172 716 656 Monoraphidium neglectum 14-3-3-like protein mRNA blastn 3173 97.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
23761423 23761423 PRJNA811237_S_NODE_8819_length_255_cov_2.422330_g8579_i0 PRJNA811237 8819 255 2.42233 6.1769415 Monoraphidium neglectum 145388 Plants Plants 124 4.839999999999999e-24   NTclustered gi|926777351|ref|XM_014041696.1| 145388 g8579 i0 77.725 13.1607843137255 211 41 82 6 7 214 1 208 Monoraphidium neglectum 60S ribosomal protein L38 mRNA blastn 3356 124 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
25035237 25035237 PRJNA811237_S_NODE_19980_length_189_cov_1.678571_g19740_i0 PRJNA811237 19980 189 1.678571 3.17249919 Micromonas pusilla 38833 Plants Plants 87.9 4.45e-13   NTclustered gi|303273383|ref|XM_003056007.1| 564608 g19740 i0 83.158 0.502645502645503 95 16 50 0 93 187 416 322 Micromonas pusilla CCMP1545 component of splicing factor SF3B (MICPUCDRAFT_49441), mRNA blastn 95 87.9 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas pusilla
25450203 25450203 PRJNA811237_S_NODE_15140_length_209_cov_1.293750_g14900_i0 PRJNA811237 15140 209 1.29375 2.7039375 Eukaryota 2759 Plants Plants 219 1.71e-52   NTclustered gi|760450068|ref|XM_011403801.1| 3075 g14900 i0 86.139 52.822966507177 202 28 97 0 8 209 58 259 Auxenochlorella protothecoides Peptidyl-prolyl cis-trans isomerase CYP18-4 partial mRNA blastn 11040 219 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;