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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA811237" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA811237 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2499072 2499072 PRJNA811237_S_NODE_15222_length_209_cov_0.956250_g14982_i0 PRJNA811237 15222 209 0.95625 1.9985625 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|915004033|ref|XM_013393842.1| 5801 g14982 i0 100 0.277511961722488 29 0 14 0 102 130 504 476 Eimeria acervulina hypothetical protein partial mRNA blastn 58 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
4637320 4637320 PRJNA811237_S_NODE_6904_length_283_cov_1.081197_g6664_i0 PRJNA811237 6904 283 1.081197 3.05978751 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 62.1 4.34e-5   NTclustered gi|915130758|ref|XM_013479948.1| 5804 g6664 i0 100 12.0600706713781 33 0 12 0 67 99 3321 3289 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 3413 62.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
5912270 5912270 PRJNA811237_S_NODE_9165_length_252_cov_1.004926_g8925_i0 PRJNA811237 9165 252 1.004926 2.53241352 Plasmodium cynomolgi 5827 SAR_Eukaryotes SAR_Eukaryotes 71.3 6.31e-8   NTclustered gi|457868315|ref|XM_004221032.1| 1120755 g8925 i0 88.333 15.7222222222222 60 5 24 1 172 231 16299 16242 Plasmodium cynomolgi strain B ubiquitin-protein ligase 1 (PCYB_051510) mRNA, complete cds blastn 3962 71.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium cynomolgi
14837051 14837051 PRJNA811237_S_NODE_5132_length_321_cov_1.474265_g4892_i0 PRJNA811237 5132 321 1.474265 4.73239065 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|916414171|ref|XM_013372863.1| 5802 g4892 i0 96.875 0.0996884735202492 32 1 10 0 202 233 2023 1992 Eimeria tenella uncharacterized protein (ETH_00030875), partial mRNA blastn 32 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
15251636 15251636 PRJNA811237_S_NODE_29892_length_165_cov_1.163793_g29652_i0 PRJNA811237 29892 165 1.163793 1.92025845 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 86.1 1.36e-12   NTclustered gi|67623452|ref|XM_662917.1| 353151 g29652 i0 94.545 1 55 3 33 0 98 152 785 839 Cryptosporidium hominis TU502 fructose-1,6-bisphosphate aldolase (Chro.10335) partial mRNA blastn 165 86.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis
23761338 23761338 PRJNA811237_S_NODE_14999_length_210_cov_1.012422_g14759_i0 PRJNA811237 14999 210 1.012422 2.1260862 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.001   NTclustered gi|1624689154|ref|XM_029009452.1| 189622 g14759 i0 100 0.142857142857143 30 0 14 0 139 168 1153 1182 Babesia ovata decapping 5 (BOVATA_005350), partial mRNA blastn 30 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;