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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA807685" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 4 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA807685 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2498290 2498290 PRJNA807685_P_NODE_27462_length_249_cov_1.943396_g26389_i0 PRJNA807685 27462 249 1.943396 4.83905604 Haloferax 2251 Archaea Archaea 165 2.77e-36   NTclustered gi|1810670185|gb|CP048738.1| 2246 g26389 i0 78.884 10.714859437751 251 47 99 6 2 249 3086364 3086611 Haloferax volcanii strain wsp1 chromosome, complete genome blastn 2668 165 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax volcanii
4634901 4634901 PRJNA807685_P_NODE_23644_length_277_cov_2.008333_g22571_i0 PRJNA807685 23644 277 2.008333 5.56308241 Halobaculum sp. CBA1158 2904243 Archaea Archaea 65.8 3.27e-6   NTclustered gi|2176093559|gb|CP090371.1| 2904243 g22571 i0 91.489 0.169675090252708 47 4 17 0 120 166 1890922 1890876 Halobaculum sp. CBA1158 chromosome, complete genome blastn 47 65.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum sp. CBA1158
9734438 9734438 PRJNA807685_P_NODE_16548_length_363_cov_1.153374_g15478_i0 PRJNA807685 16548 363 1.153374 4.18674762 Haloarcula litorea 3032579 Archaea Archaea 320 8.55e-83   NTclustered gi|2463595526|gb|CP119779.1| 3032579 g15478 i0 82.967 51.3388429752066 364 52 99 9 1 359 269393 269035 Haloarcula litorea strain GDY20 chromosome, complete genome blastn 18636 320 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula litorea
13560199 13560199 PRJNA807685_P_NODE_37291_length_203_cov_0.909639_g36218_i0 PRJNA807685 37291 203 0.909639 1.84656717 Natrarchaeobaculum sulfurireducens 2044521 Archaea Archaea 87.9 4.85e-13   NTclustered gi|1464915720|gb|CP027033.1| 2044521 g36218 i0 87.838 0.729064039408867 74 9 36 0 21 94 2360195 2360122 Natrarchaeobaculum sulfurireducens strain AArc-Mg chromosome, complete genome blastn 148 87.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrarchaeobaculum Natrarchaeobaculum sulfurireducens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;