RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA807685" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA807685 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3774510 3774510 PRJNA807685_P_NODE_16183_length_369_cov_1.674699_g15113_i0 PRJNA807685 16183 369 1.674699 6.17963931 root 1 Root_unresolved Root_unresolved 54.7 0.01   NTclustered gi|1603819787|ref|XM_028558535.1| 151771 g15113 i0 88.636 0.653116531165312 44 5 12 0 53 96 2117 2074 PREDICTED: Dendronephthya gigantea putative ankyrin repeat protein RF_0381 (LOC114537495), mRNA blastn 241 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
4634890 4634890 PRJNA807685_P_NODE_21984_length_292_cov_1.796078_g20911_i0 PRJNA807685 21984 292 1.796078 5.24454776 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.027   NTclustered gi|2917940720|emb|OZ237562.1| 6108 g20911 i0 100 0.0958904109589041 28 0 10 0 85 112 13121443 13121470 Anemonia sulcata genome assembly, chromosome: 8 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
19933403 19933403 PRJNA807685_P_NODE_63216_length_155_cov_0.983051_g62143_i0 PRJNA807685 63216 155 0.983051 1.52372905 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.013   NTclustered gi|2917940693|emb|OZ237556.1| 6108 g62143 i0 100 0.180645161290323 28 0 18 0 111 138 8736399 8736372 Anemonia sulcata genome assembly, chromosome: 2 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;