RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA807685" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA807685 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4634847 4634847 PRJNA807685_P_NODE_16024_length_371_cov_6.056886_g14954_i0 PRJNA807685 16024 371 6.056886 22.47104706 Potyvirus ampeloprasi 3240464 Viruses Viruses 612 1.2899999999999999e-170   NTclustered gi|1722561972|gb|MN059543.1| 42004 g14954 i0 96.505 100.026954177898 372 10 100 2 1 371 9973 10342 Leek yellow stripe virus isolate G102-2, complete genome blastn 37110 612 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus ampeloprasi
12286167 12286167 PRJNA807685_P_NODE_6790_length_735_cov_2.176218_g5870_i0 PRJNA807685 6790 735 2.176218 15.9952023 Aspergillus tennesseensis narnavirus 1 2875495 Viruses Viruses 640 1.2299999999999998e-178   NTclustered gi|2130544303|dbj|LC648939.1| 2875495 g5870 i0 82.685 1.01360544217687 745 105 99 20 3 735 560 1292 Aspergillus tennesseensis narnavirus 1 J-YC genomic RNA, segment 3, complete sequence blastn 745 640 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Aspergillus tennesseensis narnavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;