RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA807347" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA807347 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11010195 11010195 PRJNA807347_P_NODE_8309_length_286_cov_1.690141_g8206_i0 PRJNA807347 8309 286 1.690141 4.83380326 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 115 3.32e-21   NTclustered gi|60700756|gb|AY915859.1| 6182 g8206 i0 87.5 0.363636363636364 104 8 35 1 1 99 105 2 Schistosoma japonicum SJCHGC09793 protein mRNA, complete cds blastn 104 115 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
17384608 17384608 PRJNA807347_P_NODE_2634_length_520_cov_1.782998_g2531_i0 PRJNA807347 2634 520 1.782998 9.2715896 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 464 5.519999999999999e-126   NTclustered gi|60698688|gb|AY915747.1| 6182 g2531 i0 97.77 2.30384615384615 269 6 86 0 179 447 330 62 Schistosoma japonicum SJCHGC09661 protein mRNA, partial cds blastn 1198 464 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;