RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA807347" and tax_phylum = "Deinococcota"

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tax_superkingdom 1

tax_phylum 1

  • Deinococcota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA807347 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2082052 2082052 PRJNA807347_P_NODE_17202_length_242_cov_0.911243_g17099_i0 PRJNA807347 17202 242 0.911243 2.20520806 Thermus sp. NEB1569 2918899 Bacteria Bacteria 425 1.11e-114   NTclustered gi|2199052145|gb|CP092445.1| 2918899 g17099 i0 98.347 5.03305785123967 242 4 100 0 1 242 1664464 1664223 Thermus sp. NEB1569 chromosome, complete genome blastn 1218 425 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp. NEB1569
18657652 18657652 PRJNA807347_P_NODE_12575_length_251_cov_0.870787_g12472_i0 PRJNA807347 12575 251 0.870787 2.18567537 Thermus sp. NEB1569 2918899 Bacteria Bacteria 448 2.48e-121   NTclustered gi|2199052145|gb|CP092445.1| 2918899 g12472 i0 98.805 8.8605577689243 251 3 100 0 1 251 1818017 1818267 Thermus sp. NEB1569 chromosome, complete genome blastn 2224 448 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp. NEB1569

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;