RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA807347" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA807347 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7184579 7184579 PRJNA807347_P_NODE_1966_length_596_cov_2.397706_g1865_i0 PRJNA807347 1966 596 2.397706 14.29032776 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 985 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g1865 i0 96.477 67.3406040268456 596 21 100 0 1 596 605 10 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 40135 985 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
8875790 8875790 PRJNA807347_P_NODE_7987_length_290_cov_1.755760_g7884_i0 PRJNA807347 7987 290 1.75576 5.091704 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 520 6.119999999999998e-143   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g7884 i0 98.966 22.944827586206905 290 3 100 0 1 290 1165 1454 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 6654 520 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
16108696 16108696 PRJNA807347_P_NODE_1193_length_750_cov_2.819793_g1099_i0 PRJNA807347 1193 750 2.819793 21.1484475 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 1256 0   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g1099 i0 96.929 50.1866666666667 749 23 99 0 2 750 2293 1545 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 37640 1256 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;