contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJNA806354" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1222400 | 1222400 | PRJNA806354_P_NODE_41581_length_239_cov_2.759036_g41472_i0 | PRJNA806354 | 41581 | 239 | 2.759036 | 6.59409604 | Streptococcus | 1301 | Bacteria | Bacteria | 436 | 5.0799999999999985e-118 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g41472 | i0 | 99.582 | 325 | 239 | 1 | 100 | 0 | 1 | 239 | 1570635 | 1570397 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 77675 | 436 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 2497940 | 2497940 | PRJNA806354_P_NODE_30342_length_270_cov_0.771574_g30233_i0 | PRJNA806354 | 30342 | 270 | 0.771574 | 2.0832498 | Bacillati | 1783272 | Bacteria | Bacteria | 479 | 9.58e-131 | NTclustered | gi|2094469357|gb|OK103765.1| | 69967 | g30233 | i0 | 98.881 | 99.237037037037 | 268 | 3 | 99 | 0 | 3 | 270 | 44 | 311 | Macrococcus equipercicus strain LT-01 16S ribosomal RNA gene, partial sequence | blastn | 26794 | 479 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Macrococcus | Macrococcus equipercicus | ||
| 3357021 | 3357021 | PRJNA806354_P_NODE_39643_length_243_cov_2.258824_g39534_i0 | PRJNA806354 | 39643 | 243 | 2.258824 | 5.48894232 | Ezakiella coagulans | 46507 | Bacteria | Bacteria | 381 | 2.4599999999999995e-101 | NTclustered | gi|2238283248|gb|CP096650.1| | 46507 | g39534 | i0 | 96.916 | 0.934156378600823 | 227 | 7 | 93 | 0 | 17 | 243 | 1177721 | 1177947 | Ezakiella coagulans strain C0061C1 chromosome, complete genome | blastn | 227 | 381 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Ezakiella | Ezakiella coagulans | ||||
| 5050464 | 5050464 | PRJNA806354_P_NODE_29724_length_272_cov_1.653266_g29615_i0 | PRJNA806354 | 29724 | 272 | 1.653266 | 4.49688352 | Staphylococcus | 1279 | Bacteria | Bacteria | 497 | 2.67e-136 | NTclustered | gi|1844054309|gb|CP053477.1| | 1292 | g29615 | i0 | 99.632 | 22.9227941176471 | 272 | 1 | 100 | 0 | 1 | 272 | 233808 | 234079 | Staphylococcus warneri strain WB224 chromosome, complete genome | blastn | 6235 | 497 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 5909398 | 5909398 | PRJNA806354_P_NODE_28165_length_278_cov_5.063415_g28056_i0 | PRJNA806354 | 28165 | 278 | 5.063415 | 14.0762937 | uncultured Listeria sp. | 592375 | Bacteria | Bacteria | 351 | 2.25e-92 | NTclustered | gi|453201751|gb|JQ999659.1| | 592375 | g28056 | i0 | 90.217 | 373.262589928058 | 276 | 17 | 97 | 9 | 2 | 270 | 510 | 238 | Uncultured Listeria sp. clone GKJWQY101AOVRM 23S ribosomal RNA gene, partial sequence | blastn | 103767 | 351 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | uncultured Listeria sp. | ||
| 6326368 | 6326368 | PRJNA806354_P_NODE_26585_length_286_cov_1.431925_g26476_i0 | PRJNA806354 | 26585 | 286 | 1.431925 | 4.0953055 | Staphylococcus | 1279 | Bacteria | Bacteria | 529 | 1e-145 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g26476 | i0 | 100 | 100 | 286 | 0 | 100 | 0 | 1 | 286 | 917563 | 917848 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 28600 | 529 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 8459041 | 8459041 | PRJNA806354_P_NODE_36167_length_249_cov_1.732955_g36058_i0 | PRJNA806354 | 36167 | 249 | 1.732955 | 4.31505795 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g36058 | i0 | 100 | 99.995983935743 | 249 | 0 | 100 | 0 | 1 | 249 | 1915167 | 1915415 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 24899 | 460 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 8459103 | 8459103 | PRJNA806354_P_NODE_41887_length_235_cov_4.049383_g41778_i0 | PRJNA806354 | 41887 | 235 | 4.049383 | 9.51605005 | Abyssicoccus albus | 1817405 | Bacteria | Bacteria | 435 | 1.79e-117 | NTclustered | gi|1142909432|gb|CP019573.1| | 1817405 | g41778 | i0 | 100 | 569.225531914894 | 235 | 0 | 100 | 0 | 1 | 235 | 292866 | 293100 | Abyssicoccus albus strain S31 chromosome, complete genome | blastn | 133768 | 435 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Abyssicoccaceae | Abyssicoccus | Abyssicoccus albus | ||
| 10150936 | 10150936 | PRJNA806354_P_NODE_42168_length_232_cov_2.603774_g42059_i0 | PRJNA806354 | 42168 | 232 | 2.603774 | 6.04075568 | root | 1 | Root_unresolved | Root_unresolved | 429 | 8.2e-116 | NTclustered | gi|2484409883|gb|OQ804706.1| | 1282 | g42059 | i0 | 100 | 180 | 232 | 0 | 100 | 0 | 1 | 232 | 586 | 817 | Staphylococcus epidermidis strain RPB-57 16S ribosomal RNA gene, partial sequence | blastn | 41760 | 429 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 11426197 | 11426197 | PRJNA806354_P_NODE_15809_length_360_cov_3.066202_g15700_i0 | PRJNA806354 | 15809 | 360 | 3.066202 | 11.0383272 | Macrococcus | 69965 | Bacteria | Bacteria | 412 | 1.3599999999999994e-110 | NTclustered | gi|2899141610|gb|CP179728.1| | 3395466 | g15700 | i0 | 94.118 | 376.2 | 272 | 14 | 75 | 2 | 91 | 360 | 1157849 | 1158120 | Macrococcus sp. 18KM676 chromosome, complete genome | blastn | 135432 | 412 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Macrococcus | Macrococcus sp. 18KM676 | ||
| 11426198 | 11426198 | PRJNA806354_P_NODE_17589_length_343_cov_7.659259_g17480_i0 | PRJNA806354 | 17589 | 343 | 7.659259 | 26.27125837 | root | 1 | Root_unresolved | Root_unresolved | 634 | 2.5299999999999996e-177 | NTclustered | gi|1796975023|gb|CP033086.1| | 1280 | g17480 | i0 | 100 | 99.3061224489796 | 343 | 0 | 100 | 0 | 1 | 343 | 2463320 | 2463662 | Staphylococcus aureus strain WH9628 chromosome | blastn | 34062 | 634 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 13559564 | 13559564 | PRJNA806354_P_NODE_26451_length_286_cov_3.211268_g26342_i0 | PRJNA806354 | 26451 | 286 | 3.211268 | 9.18422648 | Abyssicoccus albus | 1817405 | Bacteria | Bacteria | 529 | 1e-145 | NTclustered | gi|1142909432|gb|CP019573.1| | 1817405 | g26342 | i0 | 100 | 587.727272727273 | 286 | 0 | 100 | 0 | 1 | 286 | 292213 | 292498 | Abyssicoccus albus strain S31 chromosome, complete genome | blastn | 168090 | 529 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Abyssicoccaceae | Abyssicoccus | Abyssicoccus albus | ||
| 13976271 | 13976271 | PRJNA806354_P_NODE_41591_length_239_cov_2.656627_g41482_i0 | PRJNA806354 | 41591 | 239 | 2.656627 | 6.34933853 | Enterococcus | 1350 | Bacteria | Bacteria | 442 | 1.0899999999999994e-119 | NTclustered | gi|2236304959|gb|CP097038.1| | 1351 | g41482 | i0 | 100 | 100 | 239 | 0 | 100 | 0 | 1 | 239 | 143790 | 144028 | Enterococcus faecalis strain AT39 chromosome, complete genome | blastn | 23900 | 442 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecalis | ||
| 16108576 | 16108576 | PRJNA806354_P_NODE_8173_length_488_cov_2.279518_g8064_i0 | PRJNA806354 | 8173 | 488 | 2.279518 | 11.12404784 | Staphylococcus warneri | 1292 | Bacteria | Bacteria | 564 | 4.94e-156 | NTclustered | gi|1714036495|gb|CP031269.1| | 1292 | g8064 | i0 | 87.6 | 508.340163934426 | 500 | 45 | 99 | 14 | 3 | 487 | 2267399 | 2266902 | Staphylococcus warneri strain 16A chromosome, complete genome | blastn | 248070 | 564 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 17384336 | 17384336 | PRJNA806354_P_NODE_33794_length_256_cov_1.448087_g33685_i0 | PRJNA806354 | 33794 | 256 | 1.448087 | 3.70710272 | Faecalitalea cylindroides | 39483 | Bacteria | Bacteria | 418 | 1.9899999999999994e-112 | NTclustered | gi|295098739|emb|FP929041.1| | 717960 | g33685 | i0 | 98.723 | 444.171875 | 235 | 3 | 92 | 0 | 18 | 252 | 137478 | 137244 | Eubacterium cylindroides T2-87 draft genome | blastn | 113708 | 418 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Faecalitalea | Faecalitalea cylindroides | ||
| 17799964 | 17799964 | PRJNA806354_P_NODE_31814_length_264_cov_1.151832_g31705_i0 | PRJNA806354 | 31814 | 264 | 1.151832 | 3.04083648 | Weissella | 46255 | Bacteria | Bacteria | 390 | 4.5e-104 | NTclustered | gi|2788849649|gb|CP166847.1| | 1583 | g31705 | i0 | 96.596 | 555.681818181818 | 235 | 8 | 90 | 0 | 30 | 264 | 20341 | 20107 | Weissella confusa strain HYF86 chromosome HYF86, complete sequence | blastn | 146700 | 390 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella confusa | ||
| 17799974 | 17799974 | PRJNA806354_P_NODE_7454_length_510_cov_1.421053_g7345_i0 | PRJNA806354 | 7454 | 510 | 1.421053 | 7.2473703 | Aerococcus | 1375 | Bacteria | Bacteria | 832 | 0 | NTclustered | gi|984726517|gb|CP014164.1| | 1377 | g7345 | i0 | 98.517 | 667.421568627451 | 472 | 6 | 92 | 1 | 3 | 473 | 19100 | 18629 | Aerococcus viridans strain CCUG4311, complete genome | blastn | 340385 | 837 | 0.994026284348865 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Aerococcaceae | Aerococcus | Aerococcus viridans | ||
| 20348769 | 20348769 | PRJNA806354_P_NODE_28976_length_275_cov_1.886139_g28867_i0 | PRJNA806354 | 28976 | 275 | 1.886139 | 5.18688225 | Streptococcus | 1301 | Bacteria | Bacteria | 503 | 5.809999999999998e-138 | NTclustered | gi|1578096036|emb|LR216035.1| | 1313 | g28867 | i0 | 100 | 334.312727272727 | 272 | 0 | 99 | 0 | 4 | 275 | 1835238 | 1834967 | Streptococcus pneumoniae isolate SA_GPS_SP505-sc-1895675 genome assembly, chromosome: 1 | blastn | 91936 | 503 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus pneumoniae | ||
| 25032478 | 25032478 | PRJNA806354_P_NODE_32460_length_261_cov_1.632979_g32351_i0 | PRJNA806354 | 32460 | 261 | 1.632979 | 4.26207519 | Streptococcus sp. NPS 308 | 1902136 | Bacteria | Bacteria | 464 | 2.5799999999999994e-126 | NTclustered | gi|1080114141|dbj|AP017652.1| | 1902136 | g32351 | i0 | 98.846 | 99.3371647509579 | 260 | 3 | 99 | 0 | 2 | 261 | 1395628 | 1395887 | Streptococcus sp. NPS 308 DNA, complete genome | blastn | 25927 | 464 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus sp. NPS 308 | ||
| 25032544 | 25032544 | PRJNA806354_P_NODE_40380_length_242_cov_1.674556_g40271_i0 | PRJNA806354 | 40380 | 242 | 1.674556 | 4.05242552 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|2536852070|gb|CP129374.1| | 1282 | g40271 | i0 | 100 | 100 | 242 | 0 | 100 | 0 | 1 | 242 | 241208 | 240967 | Staphylococcus epidermidis strain CSMH-411EB chromosome, complete genome | blastn | 24200 | 448 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;