RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA806354" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA806354 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2497929 2497929 PRJNA806354_P_NODE_18342_length_337_cov_2.166667_g18233_i0 PRJNA806354 18342 337 2.166667 7.30166779 Cyanophyceae 3028117 Bacteria Bacteria 610 4.18e-170   NTclustered gi|365927862|gb|JN825312.1| 1211 g18233 i0 99.407 101.848664688427 337 1 99 1 2 337 529 193 Uncultured cyanobacterium clone Alchichica_AQ2_1_1C_10 small subunit ribosomal RNA gene, partial sequence blastn 34323 610 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         uncultured cyanobacterium
3774164 3774164 PRJNA806354_P_NODE_21903_length_312_cov_1.702929_g21794_i0 PRJNA806354 21903 312 1.702929 5.31313848 root 1 Root_unresolved Root_unresolved 568 2.3399999999999998e-157   NTclustered gi|338201948|gb|JF929370.1| 1211 g21794 i0 99.677 105.288461538462 310 1 99 0 1 310 378 69 Uncultured cyanobacterium clone CMME03 16S ribosomal RNA gene, partial sequence blastn 32850 573 0.991273996509599 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         uncultured cyanobacterium
18657335 18657335 PRJNA806354_P_NODE_18435_length_337_cov_0.795455_g18326_i0 PRJNA806354 18435 337 0.795455 2.68068335 Aliterella chasmolithica 2739056 Bacteria Bacteria 551 2.5699999999999992e-152   NTclustered gi|1713066352|gb|MN243145.1| 2599943 g18326 i0 96.142 114.916913946588 337 13 100 0 1 337 1987 2323 Aliterella chasmolithica PJ S15 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 38727 551 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Aliterellaceae Aliterella Aliterella chasmolithica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;