RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA804229" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA804229 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4630377 4630377 PRJNA804229_S_NODE_122864_length_184_cov_1.397163_g121906_i0 PRJNA804229 122864 184 1.397163 2.57077992 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.016   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g121906 i0 100 0.152173913043478 28 0 15 0 157 184 28 1 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
10150514 10150514 PRJNA804229_S_NODE_137608_length_174_cov_1.320611_g136650_i0 PRJNA804229 137608 174 1.320611 2.29786314 Copiparvovirus 1511888 Viruses Viruses 311 2.19e-80   NTclustered gi|1725344901|ref|NC_031959.2| 1917013 g136650 i0 98.851 5 174 2 100 0 1 174 4777 4604 Bosavirus MS-2016a, complete genome blastn 870 311 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Copiparvovirus Copiparvovirus ungulate5
11425903 11425903 PRJNA804229_S_NODE_57689_length_265_cov_2.153153_g56731_i0 PRJNA804229 57689 265 2.153153 5.70585545 Copiparvovirus 1511888 Viruses Viruses 444 3.42e-120   NTclustered gi|1725344901|ref|NC_031959.2| 1917013 g56731 i0 99.588 3.93962264150943 243 1 92 0 1 243 2415 2657 Bosavirus MS-2016a, complete genome blastn 1044 444 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Copiparvovirus Copiparvovirus ungulate5
16524749 16524749 PRJNA804229_S_NODE_110933_length_193_cov_3.673333_g109975_i0 PRJNA804229 110933 193 3.673333 7.08953269 Copiparvovirus 1511888 Viruses Viruses 357 3.1499999999999996e-94   NTclustered gi|1725344901|ref|NC_031959.2| 1917013 g109975 i0 100 5 193 0 100 0 1 193 4149 4341 Bosavirus MS-2016a, complete genome blastn 965 357 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Copiparvovirus Copiparvovirus ungulate5
21624015 21624015 PRJNA804229_S_NODE_117477_length_188_cov_1.655172_g116519_i0 PRJNA804229 117477 188 1.655172 3.11172336 Tetraparvovirus 1511911 Viruses Viruses 342 8.539999999999999e-90   NTclustered gi|1372080036|gb|MG745679.1| 494651 g116519 i0 99.468 73.563829787234 188 1 100 0 1 188 2896 3083 Bovine hokovirus 1 isolate Guarapuava nonstructural protein 1 and capsid protein 1 genes, complete cds blastn 13830 342 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Tetraparvovirus Tetraparvovirus ungulate1
25448724 25448724 PRJNA804229_S_NODE_7120_length_558_cov_13.246602_g6249_i0 PRJNA804229 7120 558 13.246602 73.91603916 Copiparvovirus 1511888 Viruses Viruses 992 0   NTclustered gi|1725344901|ref|NC_031959.2| 1917013 g6249 i0 99.815 4.54121863799283 540 1 97 0 19 558 4808 5347 Bosavirus MS-2016a, complete genome blastn 2534 992 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Copiparvovirus Copiparvovirus ungulate5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;